| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3817 |
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| Symbol | |
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| ID | 3966891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4819612 |
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| End bp | 4819830 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922914 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_529284 |
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| Protein GI | 90023457 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00145193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCAAAAA CCAATATTGT AAACACCATT CGTACACAGC GGTTTATGGC AGGAGAGATG
ACCCAGCAAC AACTGGCTGA GCTAGTTGGG GTAACCCGTC AAACCATTAT TGCCATAGAG
GCTAATCGCT ACGCGCCGTC TTTAGAGTTA GCTTTTAAAA TTGCGCAGGC ATTTAACCTA
CCCTTGGAAG AGGTGTTTCT GCCTCCTGAA CGTGAATGA
|
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| Protein sequence | MPKTNIVNTI RTQRFMAGEM TQQQLAELVG VTRQTIIAIE ANRYAPSLEL AFKIAQAFNL
PLEEVFLPPE RE
|
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