Gene Sde_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3811 
Symbol 
ID3966885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4814965 
End bp4816875 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content40% 
IMG OID637922908 
Producthypothetical protein 
Protein accessionYP_529278 
Protein GI90023451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0654806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCATA TAAAATATTT TCTTCCCGCC GTATTATTTT CTTTTTTATT TCTTCTTCCT 
GTTGCAGAAA AAGTTCACGC CGCCGATATT TACGATTCTA AAATATTAGT AGAATTAGCT
AACGACCCCT TTTGGATGCA GTTGCTCGTA TATGAGAAAA CGAAAAGTGG CAAGTTTTCT
GCCAAAAGTG CAATTTCTTC TCCCAGCTTC TTCTTATCAG ATAAAGGTTC GGAAGATCCG
CATGCAGAGT TAAAGGCAAC GATCGATGCG TTTTTCAAGT TAGACGCTGG GCTGCCAAAT
GAGCATGCCC AATGTGTGTT TCGTGCCCGT TATATTTGGC TAAATGGTAA ACTTGAGCTA
GATAAATATT TACCCCAAAA AATAGACTGT TCTGAATATG ACAATTGGAC TGGTTATAAT
CAAGTTAAGT CGCTAAGTGT GGTTTACGCT ACTGGTTATT TAGGTAACCC CGCGTCTTAC
TATGGTCATT TGCTTTTAAA GTTAAATGGT GATGGGAGTG AAGGGAAACA ACGGCTGGAG
GACGTTACAG TAAATTTCGG CGCAATAGTA CCTGAAAACG AAAGTATGCT TCCCTATGTA
ATAAAAGGGC TTGTGGGGTC TTATGACGCA GGGTTCACTC ATCATCAGTA TTTTTACCAT
TCGCACAATT ATGGTCAAAA TGAACTACGT AACCTATGGG AATATGAGTT AGACATAGGT
CCATCCGACG TGGAGTTGAT ACTCGCTCAT ATATGGGAGC TTCGAGGGAA AAAATATAGA
TACTTTTTCT TAAATAAAAA TTGCGCCTAC CGAATGGCAG AAATAATTAG TCTGGCTAAC
GGTATAGATG TAGTTCCCCC TCAAGATTAT TGGGTTTTAC CGCAAACAAT AATTCAAAAT
CTAAGTCAGA ATACAATAAA TGATGAAAAC GTTGTGCTGA ATAAATCCAT CGTTCCGTCA
CGGCAAAGTA TATTGTACGA AGGTTTTAAA GAGTTAAATG TTGCTGAACG AGAAATACTT
CTAGGATTGA TAAACAGAAA AATAACCTAT GATTCACCAG AGTTTATAAG TCTAAAGGTG
GAAAATAAGT ATCGTCTATT GGACGTGATA ATGGACTACT ACCAATATAT GATCATTAAA
AATTCCGATA GTGAAAGCGA TATACTAGAG TCTCAATATC GTTTAGCTCT ATCAATGCGA
TTTACCTTGC CGGCGGCACC GAGAGTTGAA CCTGCAAAGC AGATTGTTGG GCCAGAATCA
GGGCGAAAAG CAAGTTATTC AAGTTTCGGC TTTTTGAATA ACAAGAGCAG TAGTGAAACG
GCAATACAGC TGCATATAAG GCCGGCCTAC TATGATGAGC TCGACTATGG TGCCGCACAT
GTGGCGCACG CGGGTTTAGC CATGGGAGAG TTATCTCTTT TGATTGAAAA CGGCAGGGTA
GACTTGCACC AGCTATCCAT CGTAAACGTT AAAGCAGTTA ACTCGAATGC TACAGGTTTG
CCAAATGATA GTCGTAGAGG ATGGATGTTG AATATAGGCG TTGAGCAATT AAATGAGCAG
TGTTCACCTG ACTGTCTTGT ACCAAGGGTA GAGGCCGGTA CTGGGCTTAG TTGGACGAAT
AATGCTTCTA GGTACCTCGT GAGTGGTTAT GTAATTGCTG GTGCCCAGAA GAACATATTT
GACTACGGAG TTTTTGACGT TTCGTTTCAA TCTGATTTAT CTTTAACTTT GTCTGAAACA
GTGCGGGCTG TAGCCAAAGC AAGAGTGGCT ACTGGTCTAA GCGATGTGAA TAGTAGGTAT
ATATATAGCT TCCATTTGAG AAAAGAGTTA AATGTAAATA GTGATGTAAG GCTGGCACTC
ACGAAGAATG AGGGTAGTTC AATAGGGTTA ACATTCGGTC ACTACTGGTA G
 
Protein sequence
MVHIKYFLPA VLFSFLFLLP VAEKVHAADI YDSKILVELA NDPFWMQLLV YEKTKSGKFS 
AKSAISSPSF FLSDKGSEDP HAELKATIDA FFKLDAGLPN EHAQCVFRAR YIWLNGKLEL
DKYLPQKIDC SEYDNWTGYN QVKSLSVVYA TGYLGNPASY YGHLLLKLNG DGSEGKQRLE
DVTVNFGAIV PENESMLPYV IKGLVGSYDA GFTHHQYFYH SHNYGQNELR NLWEYELDIG
PSDVELILAH IWELRGKKYR YFFLNKNCAY RMAEIISLAN GIDVVPPQDY WVLPQTIIQN
LSQNTINDEN VVLNKSIVPS RQSILYEGFK ELNVAEREIL LGLINRKITY DSPEFISLKV
ENKYRLLDVI MDYYQYMIIK NSDSESDILE SQYRLALSMR FTLPAAPRVE PAKQIVGPES
GRKASYSSFG FLNNKSSSET AIQLHIRPAY YDELDYGAAH VAHAGLAMGE LSLLIENGRV
DLHQLSIVNV KAVNSNATGL PNDSRRGWML NIGVEQLNEQ CSPDCLVPRV EAGTGLSWTN
NASRYLVSGY VIAGAQKNIF DYGVFDVSFQ SDLSLTLSET VRAVAKARVA TGLSDVNSRY
IYSFHLRKEL NVNSDVRLAL TKNEGSSIGL TFGHYW