Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3811 |
Symbol | |
ID | 3966885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4814965 |
End bp | 4816875 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637922908 |
Product | hypothetical protein |
Protein accession | YP_529278 |
Protein GI | 90023451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0654806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCATA TAAAATATTT TCTTCCCGCC GTATTATTTT CTTTTTTATT TCTTCTTCCT GTTGCAGAAA AAGTTCACGC CGCCGATATT TACGATTCTA AAATATTAGT AGAATTAGCT AACGACCCCT TTTGGATGCA GTTGCTCGTA TATGAGAAAA CGAAAAGTGG CAAGTTTTCT GCCAAAAGTG CAATTTCTTC TCCCAGCTTC TTCTTATCAG ATAAAGGTTC GGAAGATCCG CATGCAGAGT TAAAGGCAAC GATCGATGCG TTTTTCAAGT TAGACGCTGG GCTGCCAAAT GAGCATGCCC AATGTGTGTT TCGTGCCCGT TATATTTGGC TAAATGGTAA ACTTGAGCTA GATAAATATT TACCCCAAAA AATAGACTGT TCTGAATATG ACAATTGGAC TGGTTATAAT CAAGTTAAGT CGCTAAGTGT GGTTTACGCT ACTGGTTATT TAGGTAACCC CGCGTCTTAC TATGGTCATT TGCTTTTAAA GTTAAATGGT GATGGGAGTG AAGGGAAACA ACGGCTGGAG GACGTTACAG TAAATTTCGG CGCAATAGTA CCTGAAAACG AAAGTATGCT TCCCTATGTA ATAAAAGGGC TTGTGGGGTC TTATGACGCA GGGTTCACTC ATCATCAGTA TTTTTACCAT TCGCACAATT ATGGTCAAAA TGAACTACGT AACCTATGGG AATATGAGTT AGACATAGGT CCATCCGACG TGGAGTTGAT ACTCGCTCAT ATATGGGAGC TTCGAGGGAA AAAATATAGA TACTTTTTCT TAAATAAAAA TTGCGCCTAC CGAATGGCAG AAATAATTAG TCTGGCTAAC GGTATAGATG TAGTTCCCCC TCAAGATTAT TGGGTTTTAC CGCAAACAAT AATTCAAAAT CTAAGTCAGA ATACAATAAA TGATGAAAAC GTTGTGCTGA ATAAATCCAT CGTTCCGTCA CGGCAAAGTA TATTGTACGA AGGTTTTAAA GAGTTAAATG TTGCTGAACG AGAAATACTT CTAGGATTGA TAAACAGAAA AATAACCTAT GATTCACCAG AGTTTATAAG TCTAAAGGTG GAAAATAAGT ATCGTCTATT GGACGTGATA ATGGACTACT ACCAATATAT GATCATTAAA AATTCCGATA GTGAAAGCGA TATACTAGAG TCTCAATATC GTTTAGCTCT ATCAATGCGA TTTACCTTGC CGGCGGCACC GAGAGTTGAA CCTGCAAAGC AGATTGTTGG GCCAGAATCA GGGCGAAAAG CAAGTTATTC AAGTTTCGGC TTTTTGAATA ACAAGAGCAG TAGTGAAACG GCAATACAGC TGCATATAAG GCCGGCCTAC TATGATGAGC TCGACTATGG TGCCGCACAT GTGGCGCACG CGGGTTTAGC CATGGGAGAG TTATCTCTTT TGATTGAAAA CGGCAGGGTA GACTTGCACC AGCTATCCAT CGTAAACGTT AAAGCAGTTA ACTCGAATGC TACAGGTTTG CCAAATGATA GTCGTAGAGG ATGGATGTTG AATATAGGCG TTGAGCAATT AAATGAGCAG TGTTCACCTG ACTGTCTTGT ACCAAGGGTA GAGGCCGGTA CTGGGCTTAG TTGGACGAAT AATGCTTCTA GGTACCTCGT GAGTGGTTAT GTAATTGCTG GTGCCCAGAA GAACATATTT GACTACGGAG TTTTTGACGT TTCGTTTCAA TCTGATTTAT CTTTAACTTT GTCTGAAACA GTGCGGGCTG TAGCCAAAGC AAGAGTGGCT ACTGGTCTAA GCGATGTGAA TAGTAGGTAT ATATATAGCT TCCATTTGAG AAAAGAGTTA AATGTAAATA GTGATGTAAG GCTGGCACTC ACGAAGAATG AGGGTAGTTC AATAGGGTTA ACATTCGGTC ACTACTGGTA G
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Protein sequence | MVHIKYFLPA VLFSFLFLLP VAEKVHAADI YDSKILVELA NDPFWMQLLV YEKTKSGKFS AKSAISSPSF FLSDKGSEDP HAELKATIDA FFKLDAGLPN EHAQCVFRAR YIWLNGKLEL DKYLPQKIDC SEYDNWTGYN QVKSLSVVYA TGYLGNPASY YGHLLLKLNG DGSEGKQRLE DVTVNFGAIV PENESMLPYV IKGLVGSYDA GFTHHQYFYH SHNYGQNELR NLWEYELDIG PSDVELILAH IWELRGKKYR YFFLNKNCAY RMAEIISLAN GIDVVPPQDY WVLPQTIIQN LSQNTINDEN VVLNKSIVPS RQSILYEGFK ELNVAEREIL LGLINRKITY DSPEFISLKV ENKYRLLDVI MDYYQYMIIK NSDSESDILE SQYRLALSMR FTLPAAPRVE PAKQIVGPES GRKASYSSFG FLNNKSSSET AIQLHIRPAY YDELDYGAAH VAHAGLAMGE LSLLIENGRV DLHQLSIVNV KAVNSNATGL PNDSRRGWML NIGVEQLNEQ CSPDCLVPRV EAGTGLSWTN NASRYLVSGY VIAGAQKNIF DYGVFDVSFQ SDLSLTLSET VRAVAKARVA TGLSDVNSRY IYSFHLRKEL NVNSDVRLAL TKNEGSSIGL TFGHYW
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