| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3808 |
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| Symbol | |
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| ID | 3966882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4809169 |
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| End bp | 4810302 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922905 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_529275 |
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| Protein GI | 90023448 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC ACTTATTTAA CTTCCACGAT GTATTTCTGC TCATTACCAC CGCTATTTGC
CTACTACTGT GTTTATTCCA GTGGCTAATT TTTGAAAAGC GGCCCGAACG AGGCGTGTTA
GCGGGGTTTT TGTTCTCGTT GGCTGTGACC AATATCACTG TTTTGTTTAT GTGGAGCGAC
AAAATAATCG TGCCCCCTTT CGCGGTAGTA TGGATTCTGC CCTATACCCT TATGGCTAGC
CTGCTGCTAC ATGGCCCATT GCTATTTTTA TATGTGCGCA TGCTTACTCG CCACAATGCC
GAGCTGCACA AATTCGATTT GTGGCACCTT GCGCCATTAG TCGTGCTATT TGTAGTGATG
GCCAGCCTAG GCATACACAG TGTAGACCTA CTACAACGTA CAGAGCGCCC AGCAGAAACG
GACATAATTG GCATTATTTG GGCTATCGCA AAAATCCAAC CGGTTGTTTA TTGTGTAGCC
GCCGTACTTT TAGTGCAGCG CTACATTAAA CGCCTACAGC ACCAGTACGC CAGCTTTTCG
CTGACAGAAC CTGTGTGGCT AATGATGCTC TCTGGCGGGT TTTTATTGAA TTGGGGTTGG
TCGTTTTTAG TGTACTTAAT TGCTAAATTT TCTAGCCCTC AATTGGCCGA TAAACTTGGC
ATTGCCGATA ACTATGTCAC TTTCGTACTT ATTATTGCGC TGTTCGTTTA CGGCGTGGCC
CATGCGCAAA AATTACTAAG CACTAAACCC GATACCCCAC GCGAAACCCA CGAAGACAAT
TACGACAAGC GTGATATAGA CCGTATAGTG CAAGCCATGG AAACCGACCT GCTGTATTTA
GAACACAATG TGAATTTAGA AAGCGTGGCA GAGAAAGTAA AACTTAGCAG CCGCACTGTG
TCGCAAATAA TAAACAAACA CTTTGGCACA AATTTTTACG AATATATTAA TTCCTACCGC
ATAGAAGCGG CAAAGCGTAT GTTGGCCGAC CCCGCATACA AAGAAATGAC AATTTTAGAT
ATTTTGATGA AAAGCGGCTT TAACAGCAAA TCGGCATTCC ATCGCTTTTT TAATCGTTTA
GTGGGCACCT CACCTACGGC ATATAGAAAA AAAATGCTCA CAGAGAAAGA GTAA
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| Protein sequence | MKEHLFNFHD VFLLITTAIC LLLCLFQWLI FEKRPERGVL AGFLFSLAVT NITVLFMWSD
KIIVPPFAVV WILPYTLMAS LLLHGPLLFL YVRMLTRHNA ELHKFDLWHL APLVVLFVVM
ASLGIHSVDL LQRTERPAET DIIGIIWAIA KIQPVVYCVA AVLLVQRYIK RLQHQYASFS
LTEPVWLMML SGGFLLNWGW SFLVYLIAKF SSPQLADKLG IADNYVTFVL IIALFVYGVA
HAQKLLSTKP DTPRETHEDN YDKRDIDRIV QAMETDLLYL EHNVNLESVA EKVKLSSRTV
SQIINKHFGT NFYEYINSYR IEAAKRMLAD PAYKEMTILD ILMKSGFNSK SAFHRFFNRL
VGTSPTAYRK KMLTEKE
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