Gene Sde_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3803 
Symbol 
ID3966877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4803692 
End bp4804618 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content39% 
IMG OID637922900 
Producthistone-like DNA-binding protein 
Protein accessionYP_529270 
Protein GI90023443 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA TTGATTACCG AGCTGCCTAC GAACGGCAGA AGAAAGCGCG ACATGCAGCC 
GATAAGCTTC TCGAAGACAA ATCCAGAGAG CTATACGAAG CTAGCCAGAC ATTGTCGGCG
GCGTACAACC GTTTAAAAAA ACAAAAAGAA CAACTTCTCC ATCAAGAAAA ATTAGCATCT
ATAGGCCAAC TATCGGCCGG CGTAGCACAC GAAATAAATA ACCCCGCCGC GTATATTAAA
AGCAATATAA ACTCACTAAA CGCCGTACGC TGTGCGCTTG CAACCTGTTT TTCTCAATTA
GCTGATTTGC GAGAAAAGCC AGTAATCAAC TATGAAGATA TAACTCATAT AGTAGAAAAA
AATGATATAG AATTTATACT AACTGATATG CAGGAGGTTA TAGAAGATTC TTTATTTGGC
TTAGAAAAAA TTACCGGAAT AGTTAAAAGC TTAAAAGATT TTTCTAGGCC AGACACAGAC
GGTGATAGAT GCTTTTCTGT TAATGAGTGT ATTCAGAATA CGCTAAAGCT GGTATCCAGC
GAAATTAAAT ACAAAGCGGA GTTAATAACT CATTACGGCG ATGTGCCAGA GATAATGGGT
AGTTCTGGTG AGTTTTCTCA AGTTATCCTC AACCTTGTGG TTAATGCCTC TCATGCAATT
TCTGAAACTG GAAAAATAAA CATAAACACA GCCTTAGAAA ATAATTCCAT AAAAATTACC
GTATCCGATA CGGGCAAAGG AATGGACCCT AAGTTAGCAC TGAAAATATT TGATCCGTTT
TTCACCACTA AAGAAGTGGG TAAAGGGACA GGGTTAGGGC TTTCTATCTC TCATGGCATT
GTCAAAAATC TTGGTGGGTA TATTCATGTA GATAGTATCG AGGGAAAGGG TACAACATTT
ACTATTACGC TACCTGTTAA TACTTGA
 
Protein sequence
MSEIDYRAAY ERQKKARHAA DKLLEDKSRE LYEASQTLSA AYNRLKKQKE QLLHQEKLAS 
IGQLSAGVAH EINNPAAYIK SNINSLNAVR CALATCFSQL ADLREKPVIN YEDITHIVEK
NDIEFILTDM QEVIEDSLFG LEKITGIVKS LKDFSRPDTD GDRCFSVNEC IQNTLKLVSS
EIKYKAELIT HYGDVPEIMG SSGEFSQVIL NLVVNASHAI SETGKININT ALENNSIKIT
VSDTGKGMDP KLALKIFDPF FTTKEVGKGT GLGLSISHGI VKNLGGYIHV DSIEGKGTTF
TITLPVNT