Gene Sde_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3788 
Symbol 
ID3966862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4785941 
End bp4786297 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content45% 
IMG OID637922885 
Producthypothetical protein 
Protein accessionYP_529255 
Protein GI90023428 
COG category[S] Function unknown 
COG ID[COG4259] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0370713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATA AGCGCATTGT AATAATAACT ATGGCGCTGC TGTTATTGGG GGGTTGCGGC 
GCAACTTCCC AATACAAGTG GGGCAACTAC GAAAGCAATA TGTTTGAGTA CTACCACGAA
CCCGGCCGCA AAGATAAAGC CGTGTCCGAT CACTTAAAAA TGGTTGCCTC CCCCGTAGCG
CAAGGCCAAA GGCTAGCGCC AGGTATGCTT GCAGAAGCCG GTACTTTTTA TATGGAACAG
GGCGATTTAG CCAAAGCCAT TGAATACTAT CAATTAGAAA AAGCAGCATG GCCAGAAAGT
ACAAAACTCA TGGACGCGCT AATTGAAAAC TTACAAGAAA AGGTAGGGCC TAAATAA
 
Protein sequence
MINKRIVIIT MALLLLGGCG ATSQYKWGNY ESNMFEYYHE PGRKDKAVSD HLKMVASPVA 
QGQRLAPGML AEAGTFYMEQ GDLAKAIEYY QLEKAAWPES TKLMDALIEN LQEKVGPK