Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3788 |
Symbol | |
ID | 3966862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4785941 |
End bp | 4786297 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922885 |
Product | hypothetical protein |
Protein accession | YP_529255 |
Protein GI | 90023428 |
COG category | [S] Function unknown |
COG ID | [COG4259] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0370713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATA AGCGCATTGT AATAATAACT ATGGCGCTGC TGTTATTGGG GGGTTGCGGC GCAACTTCCC AATACAAGTG GGGCAACTAC GAAAGCAATA TGTTTGAGTA CTACCACGAA CCCGGCCGCA AAGATAAAGC CGTGTCCGAT CACTTAAAAA TGGTTGCCTC CCCCGTAGCG CAAGGCCAAA GGCTAGCGCC AGGTATGCTT GCAGAAGCCG GTACTTTTTA TATGGAACAG GGCGATTTAG CCAAAGCCAT TGAATACTAT CAATTAGAAA AAGCAGCATG GCCAGAAAGT ACAAAACTCA TGGACGCGCT AATTGAAAAC TTACAAGAAA AGGTAGGGCC TAAATAA
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Protein sequence | MINKRIVIIT MALLLLGGCG ATSQYKWGNY ESNMFEYYHE PGRKDKAVSD HLKMVASPVA QGQRLAPGML AEAGTFYMEQ GDLAKAIEYY QLEKAAWPES TKLMDALIEN LQEKVGPK
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