Gene Sde_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3782 
Symbol 
ID3966856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4782362 
End bp4782790 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID637922879 
Producthypothetical protein 
Protein accessionYP_529249 
Protein GI90023422 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000165271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAT TAATACTTTT AAGCGCGCTT TGCTTATTTA CTACCCTGCT TACCGCCTGT 
AATCAACAAG CAAATAATAG TCAGGGCAAT AGCGATAACG GTAACATTGT TTGGACAGAC
GAGCAGCTCG CTAAAAACAT AGCATTACAG CCAATTGCTA GCGATGGCGA CGAAAGTAAA
TTTTATATTC GCCTGCAAGG CAGCGAGCAA CCACACTACC ACGACGATCA CGATTTAACC
GTAGAGGTAT TAACCGGTAC TGCGGTTATT CACTTTAAAG AGTCGAGTCA AAGTGTAAAA
GCGGGCGATA CGATAGTCAT TAAAAAAGGC ACCTACCACT GGGCAGAAAA CACCGGCGCG
GAAGCCAGTG TAGTAATAGG TACCTTCACA CCCAAATTAC AGGGCAAAGA TTTTAGATTG
GCAGAATAG
 
Protein sequence
MYKLILLSAL CLFTTLLTAC NQQANNSQGN SDNGNIVWTD EQLAKNIALQ PIASDGDESK 
FYIRLQGSEQ PHYHDDHDLT VEVLTGTAVI HFKESSQSVK AGDTIVIKKG TYHWAENTGA
EASVVIGTFT PKLQGKDFRL AE