Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3766 |
Symbol | |
ID | 3966821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4766007 |
End bp | 4767254 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922863 |
Product | cation efflux system protein |
Protein accession | YP_529233 |
Protein GI | 90023406 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTAA TACGCTATTT ATTGGTGTTT GCCGCCACCT TGTGCGCGGT AACTTTTGGC ACCGCACACG CTCAAACGCT AACCTTGCCT CAGGCAATAG AAAAAACGCT TAGCCACAAC CCGCAGCTGC GCGGCTTTGA ATTTAAACAT AAGGCGCTAA CCGCGCAGCG TAAGCAAGCA CAACTAAAAC CACAATTTAC TTTGGCGCTA GAAGCCGAGA ATTTTGCCGG CAGCGGCGAA ATTGCCGGTA CGGATTCGGC AGAGATTACA TTGGCGCTGT CATCGGCAAT TGAACTTGGC GACAAGCAAA ACGCCCGCAT TACCGTTGTC GATGCGCAAC AACAATTAGC CTTAGCGCAA CAACAAATTG AAACCCTAGA CGTACTTGGC AATCTTTCGC GCGATTTTAT AAATGCACTG GCACTTCAAG AACAAGTAAG CCTTGCAAAC TATTCTGTAC AACTCGCACA AACAACTCTC ACTAGTGTAA CCAAGCGTGC AGAATTGGGC GCTGCACCAG AAGCCGATGT ACTGCGTGCA AAAGCGGCGC TTAGCCAAAC TAAGCTGCAA GCGCAAACAC TGAAAACCGA ATTAACAATA CGCTTTACTC AACTCGCTAA AAACTGGGGC GAACCTGCAG CTAGCTTTAA CAGAGTACAA GGTGAACTCT ATACCTTTGC ACCCGCGCAA ACCTGGCAAA ACTTGCTTGC TAGTATTGAG CAAGGCCCCG CAATTGCGCA GCTAACCAGC GAGCAGCGTA TTGCCAAGGC CCAGTATCAA TTAATAAGTA GCCAAGCGAG TAGTGACATC GAATGGCAGC TAGGCGTTCG GTCTTTTGCA TCAACCGGCG ACACGGGTTT AGTCGCCGCG GTGAGCATGC CGCTTGGCAG TAGCAAGCGA AATCGTCATT CAATGAATGC CCAGCAAGCC AAACAAGATG AGCTTGTCTA TCAACAACAA CATCAAAAAC TGCAACTGCA GGAAGTGTTA TTTAAAGCCT ACCACCTGCG CAACAACGCA ATTAACGCTG CACATACACT ACAACAAAAC ATACTGCCCA ACTTGCAACA GGCGCTGGCG CTTACTCAGC AAGCCTACGA GAGTGGACGC TACAGTTACC GCGATTGGTT AGCCGCACAG CAGGATTTAC TTGAAGCAAA TCACCAACTC ATTCAAACCG CCGCAGATGC ACACAATCAA CAAACAATGA TTGAACAGCT AACTGGGCAA GCGCTGCCAA AGCACTAA
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Protein sequence | MHLIRYLLVF AATLCAVTFG TAHAQTLTLP QAIEKTLSHN PQLRGFEFKH KALTAQRKQA QLKPQFTLAL EAENFAGSGE IAGTDSAEIT LALSSAIELG DKQNARITVV DAQQQLALAQ QQIETLDVLG NLSRDFINAL ALQEQVSLAN YSVQLAQTTL TSVTKRAELG AAPEADVLRA KAALSQTKLQ AQTLKTELTI RFTQLAKNWG EPAASFNRVQ GELYTFAPAQ TWQNLLASIE QGPAIAQLTS EQRIAKAQYQ LISSQASSDI EWQLGVRSFA STGDTGLVAA VSMPLGSSKR NRHSMNAQQA KQDELVYQQQ HQKLQLQEVL FKAYHLRNNA INAAHTLQQN ILPNLQQALA LTQQAYESGR YSYRDWLAAQ QDLLEANHQL IQTAADAHNQ QTMIEQLTGQ ALPKH
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