| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3764 |
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| Symbol | uvrD |
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| ID | 3966819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4763134 |
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| End bp | 4765308 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922861 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_529231 |
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| Protein GI | 90023404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAT CTTACTTACT TGACGGTTTA AATGAGCCCC AGCGCGAAGC GGTATCCGCC
CCGCTGGGTA ATATTCTTGT GCTTGCGGGG GCTGGCAGCG GTAAAACGCG AGTGCTGGTG
CACCGTATCG CCTGGCATAT TCAGGTGGAA GGCCTTTCGC CCCACCAGAT TATGGCGGTA
ACCTTTACCA ATAAGGCCGC GCGCGAAATG CGTTCGCGCC TAGATGAGAT TATGGGTGAG
CGCTTAGGCC CTAGTGGCGT GCGCAGTATG TGGGTAGGTA CCTTCCACGG TATTGCTCAC
CGCTTATTAA AGGCCCACTG GCAAGAAGCC GGTTTGCCAC AAAACTTCCA AATATTGGAT
AGCGACGATC AACTGCGCGT AGTTAAGCGC GTTTATCAAG AGCTGCAAAT TGACGACAGT
CGCTTCCCGT TCAAGCAAGC CCAGTGGTTT ATTAACGGTC AAAAAGACGA AGGTATTCGG
CCGCAATATA TTCAAGAGGG GCACGACCCG TTCCTTGCCA CCATGAAGCA GGTATACGCC
GCCTACGAAG AAGCCTGCGC GCGTGCTGGT GTGGTGGATT TCGCCGAGCT GCTATTGCGA
TCCCACGAGT TGTGGTTAAA AAATCCCACG TTGCTTAAAC ACTACCAAAA CCGTTTTCGC
GCCTTGCTGG TGGACGAATT TCAAGATACC AACTCGGTAC AGTATGCCTG GTTGCGGGTG
CTGGCAGGGC CAGAGGGCTG TATTACGGCG GTAGGTGACG ACGACCAATC TATTTACGGT
TGGCGCGGTG CCAAAATAGA AAATATTCAG CAGTTTGAAG TAGATTTTAA AAACGTAAAC
ACCATTCGCT TAGAGCAAAA CTACCGTTCT ACGGGCACCA TATTGGAAGC CGCCAACGCG
GTTATTACCA ATAACTCGCA GCGACTGGGT AAAAAACTGT GGACATCGGG CGCCGATGGC
GAGCTTATCG ATTTATATTC TGCATTTAAT GAGCAAGATG AAGCGCGTTA TATCGTCGAG
CGCATTTCTG AATGGGTGAA AGATGGCGGC GCTCGCGAAG ACGTTGCTGT GCTGTATCGC
TCGAATGCTC AATCGCGGGT GCTAGAAGAA GCGTTTATTC GCGAAGGCAT GGCGTACCGC
ATATACGGTG GTCAGCGATT CTACGAGCGC CTAGAAATTA AAAATGCCCT GGCCTATGGT
CGACTCATTT TAAACCGCCA AGACGATGCC GCCTTTGAGC GGGTTATTAA CACGCCAACG
CGCGGTATAG GCAGCAAAAC GGTGGATACT CTTCGCCTAA TGGCGCGCGA GCAAGGCTTT
AGCATGTACG AAGCCATGTT GGGCGCTATT CGCAATGGTG TATTTACCGC TCGCGCAACA
AATGCATTAA AAGCGTTCGA CGAATTGTTA AAGCTGTTAG AAGCCAGTAT TGCTGCGGCG
CGCTTGCCAG ATCAAATGGA TATTATTATT AATGAATCTG GCTTAAAAGA TTTTCACGCA
AAAGAAAAAG GTGAGCGCGG TCAGGCGCGA CTAGAAAACT TGAACGAATT AGTTGTGGCC
TGCGGCGCAT TTAATGCCGA AGACGACGAG ATATCTCCGC TGGCAGAATT TTTAGATCGC
GCTGCGCTAG ATGCCGGCGA TCAACAAGCC GATGAGTACG AAGATGCGGT GCAAATGATG
ACTCTGCACA GCGCAAAGGG TTTGGAATTC CCGCTGGTCT TCTTGGTGGG CATGGAAGAA
AACCTCTTCC CCCATAAAAT GAGTATGGAA GATGCCGGTG GCTTAGAAGA GGAGCGTCGA
CTGGCTTATG TAGGCATTAC CCGCGCTATG AAAAAGCTGG TGCTTACCTA TGCAGAAAGC
CGCCGCATGT ATGGCAACGA AAATTTTAAT GCTATATCGC GTTTTGTAAG GGAAATTCCT
AAGCAGCTTG TTGAAGAAGT GCGTATTAAC ACTACCGTTA CACGCCCCAG TAGTTACTCC
ACATCCCCAT TGTTAACCGG CACAACCTCT ACAGAAGGTT TTAGCCTAGG CCAAAGTGTG
TACCACCCAA TATTTGGCGA CGGAGTAATC TTGCAGTTTG AGGGTCAGGG TCCCAGCGCG
CGAGTGCAGG TAAACTTTAG TACCGAAGGC ACCAAATGGT TGGTGCTACA GTATGCGAAG
CTGGAAGCTA TTTAA
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| Protein sequence | MDVSYLLDGL NEPQREAVSA PLGNILVLAG AGSGKTRVLV HRIAWHIQVE GLSPHQIMAV
TFTNKAAREM RSRLDEIMGE RLGPSGVRSM WVGTFHGIAH RLLKAHWQEA GLPQNFQILD
SDDQLRVVKR VYQELQIDDS RFPFKQAQWF INGQKDEGIR PQYIQEGHDP FLATMKQVYA
AYEEACARAG VVDFAELLLR SHELWLKNPT LLKHYQNRFR ALLVDEFQDT NSVQYAWLRV
LAGPEGCITA VGDDDQSIYG WRGAKIENIQ QFEVDFKNVN TIRLEQNYRS TGTILEAANA
VITNNSQRLG KKLWTSGADG ELIDLYSAFN EQDEARYIVE RISEWVKDGG AREDVAVLYR
SNAQSRVLEE AFIREGMAYR IYGGQRFYER LEIKNALAYG RLILNRQDDA AFERVINTPT
RGIGSKTVDT LRLMAREQGF SMYEAMLGAI RNGVFTARAT NALKAFDELL KLLEASIAAA
RLPDQMDIII NESGLKDFHA KEKGERGQAR LENLNELVVA CGAFNAEDDE ISPLAEFLDR
AALDAGDQQA DEYEDAVQMM TLHSAKGLEF PLVFLVGMEE NLFPHKMSME DAGGLEEERR
LAYVGITRAM KKLVLTYAES RRMYGNENFN AISRFVREIP KQLVEEVRIN TTVTRPSSYS
TSPLLTGTTS TEGFSLGQSV YHPIFGDGVI LQFEGQGPSA RVQVNFSTEG TKWLVLQYAK
LEAI
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