Gene Sde_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3758 
Symbol 
ID3966793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4758262 
End bp4758666 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content49% 
IMG OID637922855 
Productputative acyl-CoA thioester hydrolase 
Protein accessionYP_529225 
Protein GI90023398 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT CAGATTTAGA CGAAGAACCC ACCCCAACAG GTGAACTCGT TTTACAAACC 
CTCGCCCTAC CCAAAGACAC CAACTCCAAT GGCGATGTAT TTGGCGGCTG GCTTATGTCG
CAAATGGATT TAGCTGGCGC CATCGCTGCA CGCGAACTGG CCAAAGGCCG CGTAACCACT
GTCGCCGTAG GTGCCATGCA CTTTTTGCGC CCCGTACCTG TCGGCGCAAC GGTAAGTTGT
TATTGCGAAA TTTTAGAGGT GGGTCGCTCA TCCATAAAAG CGTTAATCGA AGTGTGGGTA
AAACATTACA GCTTCGAAGA GCAACAAAAA GTCACCGACG GTGAGTTTGT TTATGTGTCT
ATTGATAATG CAGGGCGTAC TCGGCCGGTT TATATGGATA GGTAA
 
Protein sequence
MSSSDLDEEP TPTGELVLQT LALPKDTNSN GDVFGGWLMS QMDLAGAIAA RELAKGRVTT 
VAVGAMHFLR PVPVGATVSC YCEILEVGRS SIKALIEVWV KHYSFEEQQK VTDGEFVYVS
IDNAGRTRPV YMDR