| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3754 |
|---|
| Symbol | |
|---|
| ID | 3966789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4753250 |
|---|
| End bp | 4754647 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637922851 |
|---|
| Product | phosphate ABC transporter, permease protein |
|---|
| Protein accession | YP_529221 |
|---|
| Protein GI | 90023394 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.46452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTT CAGTACTACT TATATTTATG GCTGTCATGT TTGTTGCAGC CTATACACTT
GGCCGGGGGC GCTCACTAGC GCTCACCTCC GATACAGGCG GTGCTCGCGC ACTCAATTCA
CTGCCGTTTT ATTACGGCAT GCTCACAGCA TTGTGGGCGG CAGTGCCCGC GATTGTACTG
TTAGGTAGCT GGAGTATTTT TGACGATCAA ATTATTCAGT TTGTTGCCAC CCAGCAAATG
CCAGAAGAGA TTCGGCAGCT AGGTGAAGCT GAGCGAGGCT TGGTGCTAAA CCAAGTTTAT
TCGGTAGTGG ATGGCCAATT TATAGGCGAG GCTCCCGATT ACGTGCTAGC GGCGGCCCAC
CACATAACTG AAATGGAATC GATTAGCGTG TGGTTAAAGA GCATCCTAGT TATGCTCGCC
ATGGTAATTG GCGGTGCGCT AGTGTGGATG CGTATCCATC CACAGTTAAA AGCGCGCAAT
CAGGTAGAAA CTGCATTTCG CTACGCTCTG TTGGGCTGCG CGTGTTTAGC CATTCTTACC
ACTCTCGGTA TTGTGCTGTC GGTTTTGTTT GAATCGTTGC GCTTCTTCCA CGCCGTACCT
ATTACTGAAT TTTTGTTTGG CGCAGAGTGG AGCCCACAAA CGGCCATTCG CAAAGACCAA
GTGGCCAGCG ACGGCAGCTT CGGTGCTGTG CCCTTATTCT TGGGTACGTT ACTTATTGCC
TTTATTGCTT TAATTGTTGC CGTGCCTACT GGGCTTATGT CGGCAATATA TTTGGCAGAA
TATGCACCGC GTAAATTGCG CGGCTTTTTA AAGCCACTGC TCGAAATTCT TGCCGGTATT
CCCACGGTGG TTTACGGCTT TTTCGCCGCT TTGACGGTTG CGCCGTTTAT TCGAGATTTG
GCTTACAGCA TAGGCTTAGA CAATTACGTC ACGGTCACAT CAGAAAGTGC CCTAGCGGCA
GGCTTGGTGA TGGGCGTGAT GATTATTCCT TTTATTTCCT CTTTGTCTGA CGACGTGATT
AACGCAGTGC CGCAATCGCT GCGCGACGGT GCACTTGGGC TTGGGGCAAC CAAGTCGGAA
GTGGTTAAAC AGGTGGTTAT TCCCGCTGCA CTGCCAGGGA TTGTTGGTGG TGTGCTGTTG
GCGGCTTCGC GCGCAATTGG TGAAACCATG ATTGTTGTGA TGGCAGCTGG GATGGCGGCA
AACTTAACTG CGAACCCGCT CGATTCTGTT ACCACCGTTA CGGTGCAAAT AGTTACGTTG
CTAGTGGGCG ATCAGGAATT TGACAGCCCC AAAACACTGG CTGCATTTGC TTTGGGCTTA
ATGCTATTTG TTGTTACTTT GGTGCTTAAC TATGTGGCCT TGCACGTTGT GAAAAAATAT
CGGGAGCAGT ACGACTAA
|
|---|
| Protein sequence | MDTSVLLIFM AVMFVAAYTL GRGRSLALTS DTGGARALNS LPFYYGMLTA LWAAVPAIVL
LGSWSIFDDQ IIQFVATQQM PEEIRQLGEA ERGLVLNQVY SVVDGQFIGE APDYVLAAAH
HITEMESISV WLKSILVMLA MVIGGALVWM RIHPQLKARN QVETAFRYAL LGCACLAILT
TLGIVLSVLF ESLRFFHAVP ITEFLFGAEW SPQTAIRKDQ VASDGSFGAV PLFLGTLLIA
FIALIVAVPT GLMSAIYLAE YAPRKLRGFL KPLLEILAGI PTVVYGFFAA LTVAPFIRDL
AYSIGLDNYV TVTSESALAA GLVMGVMIIP FISSLSDDVI NAVPQSLRDG ALGLGATKSE
VVKQVVIPAA LPGIVGGVLL AASRAIGETM IVVMAAGMAA NLTANPLDSV TTVTVQIVTL
LVGDQEFDSP KTLAAFALGL MLFVVTLVLN YVALHVVKKY REQYD
|
|---|
| |