| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3736 |
|---|
| Symbol | |
|---|
| ID | 3966771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4736322 |
|---|
| End bp | 4737071 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637922833 |
|---|
| Product | Na+ extrusion transport system ATP-binding protein |
|---|
| Protein accession | YP_529203 |
|---|
| Protein GI | 90023376 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACGG CGAATAATAT TCACAAGGCT TACAGGTTAA ATAAAAAAGA GCAAAAATTG
CAGCACGCCA AACATATTCA GGTGCTAAAG GGCGTAAGTT TTAACTGTAA GCCCGGTACC
GTAACGGGTT TGCTGGGTGT GAATGGGGCA GGCAAAACCA CCACCCTGCG TACGCTGACT
GGTGCCATAA GCGCCGACAA AGGCAATGTG ACTCTGGATG GCTTAGATGT GCATACCAAT
AAGCAAGCCG CGCTTGGCTT GGGGTTTCAT TCGGCGAGCA CAGCGCTATA TAAACGTTTG
AGTGTATTGG CGAATCTTGA ATTTTTTGGC GGCCTATATG GTTTAAAAGG AGCCAACTTA
ACTGCCCGTG TGAATGAACT GGCCGACCGA TTGGGGTTCG CTCACTACCT TGAAAAGCGT
GTAAAAGATC TTTCTACCGG CATGTTGCAA AAGGCTGCAA TAGCGCGGGC CATTCTACAC
GACCCCCAAA TTATTATTCT AGACGAGCCC ACCACGGGGC TAGATGTGAT GGCTTCTGCG
AATATTATTG ACTTTATTCG GCAGCAAAAA GAGTTGGGCA AAACAATCCT ATTCTCTACC
CATAATATGC ATGAAGTGGA ATCGCTGTGT GACAGTATTG TTGTGTTACA TAAAGGTGTT
GTGCACTTCG ATGGCACGTT AGAGGATTTT TGCGGCGGGA AAGATTTAGC GCGCACTATT
ACTCATGTGC TTAGTGATAA GCCCGTTTAA
|
|---|
| Protein sequence | MLTANNIHKA YRLNKKEQKL QHAKHIQVLK GVSFNCKPGT VTGLLGVNGA GKTTTLRTLT
GAISADKGNV TLDGLDVHTN KQAALGLGFH SASTALYKRL SVLANLEFFG GLYGLKGANL
TARVNELADR LGFAHYLEKR VKDLSTGMLQ KAAIARAILH DPQIIILDEP TTGLDVMASA
NIIDFIRQQK ELGKTILFST HNMHEVESLC DSIVVLHKGV VHFDGTLEDF CGGKDLARTI
THVLSDKPV
|
|---|
| |