Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3735 |
Symbol | |
ID | 3966770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4735121 |
End bp | 4736299 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637922832 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_529202 |
Protein GI | 90023375 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCATT TAATTTTACG AGATTTAAAA GATTTAATTG GCGATTTAAA GTACCTATTT ATCACCCTGG GTGTTCCTTT AATTGCGACC CCGTTACTTA TCTTTTTAAT TGTGGGTATG TCGAGCGCTA AATCGCAACA AGAGGCAGAG CGACATTACC GCTTCGCCAT AAATTCGACA CAAATACTGC CCCAATTTTA CACTGCCCTG AAAATGGAAA AGCAGTTTAA TGAACAGGTA ATCGATAAAG AAATAGAAGC TACGCAGGCA TTGGAACGCG AATTGGTGGA TGCGTATATT CACGTTGAAA ATGATGGCGA TAAAATTCTG CTAACAATCT ATCATCGCGA AACAAATCAA TACAGTGAAC TTATTAATAA GCTTAAAGCT ATCGCAGAAA ATGCAAACAA TGCATTGCGC TCCGAAAAAT TCGATATGCT GGGTATTGAT AAAGTACAGC AAGGCAATTT GCTAGAGCCA GTTGTGGTAT CAGATAAGTT AGTTAAAGAA GAAAAAGAAG TGGTCGGCCA GTACCTTGGT ATGGCGTTCA ACTTTATTAT CGTAATCTGG GTATTCACCG CAATGATGAC GGTTGCGGCA GAACTAATAA CCAGCGAAAA AGAAAATAAA ACGTTAGAAA CGCTGCTTAT AAGCCCGGTA TCGCGTTCCA AAGTGTGTTT ATCTAAATGG TTAAGTGTAA CTGCCGTGGG TATGTTCTCT AGCTTAGCTA CCTTGCTTAC GTATTCTCTA TCGCTGGCTA TTGCGAGTGC GGTGTCCGAT ATAGCGTTTA TAGAGAAAAT ACTTTCGTTT ATTTCATTTT TCGAGGTTTT GCTGTTGTGG GTACTGTTAA TACCTCTATG CTTATCCATT GCCGCTGGCC TTACTGTTAT TGGTATAAAT GCATCTACTC TTAAAGAATA TCAGGGGTCG GCATCATTCT TGATGATACT CGTTATGGTT CCAGCCATGC TAGTGCTTAA CGGGGTGTTA GAGTGGAATA GCAGCACACA GTGGATGCCA GTAATAAACC TTATTGTTGC CAATATAGAG GTGATTAAAG GTACGCTTAC TTTATCTGCT GTAGCGCCGT TGGTTATTAG TAACGCTGCA TTAATCGCAG CGTTAATGGT GGTGGCAAAT AAGTTGTTTA ACACAGAGAA AGTATTGTTT TCAAATTAG
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Protein sequence | MWHLILRDLK DLIGDLKYLF ITLGVPLIAT PLLIFLIVGM SSAKSQQEAE RHYRFAINST QILPQFYTAL KMEKQFNEQV IDKEIEATQA LERELVDAYI HVENDGDKIL LTIYHRETNQ YSELINKLKA IAENANNALR SEKFDMLGID KVQQGNLLEP VVVSDKLVKE EKEVVGQYLG MAFNFIIVIW VFTAMMTVAA ELITSEKENK TLETLLISPV SRSKVCLSKW LSVTAVGMFS SLATLLTYSL SLAIASAVSD IAFIEKILSF ISFFEVLLLW VLLIPLCLSI AAGLTVIGIN ASTLKEYQGS ASFLMILVMV PAMLVLNGVL EWNSSTQWMP VINLIVANIE VIKGTLTLSA VAPLVISNAA LIAALMVVAN KLFNTEKVLF SN
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