| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3726 |
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| Symbol | |
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| ID | 3966761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4722996 |
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| End bp | 4724756 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922823 |
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| Product | phytoene dehydrogenase and related proteins-like |
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| Protein accession | YP_529193 |
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| Protein GI | 90023366 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAG CACACAAACA GCGTGAAACC ATGCTAATTA TAGGCGCGGG CTTAGGTGGC
CTTTCCACCG GTTGCTACGC ACAAATGAAT GGCTATAAAA CGCACTTATT AGAAATGCAC
GAGATACCCG GAGGATGTTG TACTTCGTGG GAAAAAGGAA AGTTCACTTT TGACTGGTGT
GTAAGCTGGT TACTTGGCAG CGGGCCGGGC AACGAAATGT ACGACGTTTG GCGTGAAATT
GGCGGGCTGG ATGGCAAACA AATTCGCCAC CCCGAAGTAT TTAATATTGT TACCACCGCC
AGCGGTGACT CGGTGCGGTT TTATTCCGAC CCCGAAAAAC TCGAAAAACA TTTGTGCGAA
ATATCCCCAG AGGATACAAA GCTTATAAAA AACTTTTGTA AAGGCTTGCG GCAGTTTATT
AAGTGCTTAA AGGTTTACCC TTTTCTTAAA CCAGTAGGGT TAATGAAATG GCACGAAAAG
GCCCGCATGC TCGCCTCGTT TATTCCACAC TTTAATTTAA TTCGCAAAAC AATATCGACC
TTAATGACCG ACTATTCGGC AAACTTTAAA AGTCCAATAC TGCAAGAAGC GTTTAATTTT
ATACTTTATG AAAAGCACCC TAACTTTCCG GTACTGCCTT TCTACTTTCA GCTCGCCTCC
CATGCCACGC ATTCGGCAGG TGTGCCAGAG CACGGCTCAC TTGGGCTGGC CCGCTCTATA
GAGGCACGCT TTCTCAAACT TGGCGGCAAG GTTAGTTACA ATACTAAGGT AGAAGAAATT
CTAGTAGAGA ACAACACGGC TGTAGGTGTG CGCTTATCCA ACGGCGAAAA ATTGTTTGCC
GATATTATTG TATCGGCCAG CGACGGTTAC AATACCGTTA TGCGTATGCT GAAGGGTAAA
TACCTTAACG ATACCTACCG CAAGCTCTAT ACCGAATGTA TAACCAAACC CGATTTGGTG
TTCCCCGGCT ATTTCACGTT GTTTCTAGGG TTGGAAAAGC ATTTTGCCGA AGGTGAGTAT
TGCACCACTT ATATTCTACC CGAGGAACTG GCCGAGCAAT TAATTGGTAT CCGCCACGCA
AGCATCAATG TGCAATTTCG CAACGCCCTC TACCCCGAAC TAAGCCCGCG AAATACCAGT
ATTATTTACC TAAGTTATTT TTGCGATATA GCGCCCTGGC GCGAGCTAGC CGAAGGTGAA
GAACAGGTGA GTCGCGATTT TAAAGGCGAG CACATTCACA CCCTGCCGGT TAAACGCGGC
AGAGCTTATC AATTAGCAAA AAAACAAGTG GCCAATTTGC TTATCGACTT TTTAGAAAAA
AAGTTCCCTG GCTTACGCAA TGCCATATCC ACACGCGATA TCGCCACCCC CCTCACTCAA
GTTCGCTACA CAGGCAACTA CGATGGCTCG GTGTTGGGCT GGCAACCCTT TGTAGAAAGC
GGTGAATCGC TGGAAGAAGA AGTAAAACGC AGTGGCCCGG GCCTACCGGG GTTACAGAAC
TTTTATTTCT CGGGTGTGTG GGCCACTACT GGTGGTTTGA TACGTGCCGC TACCGCGGGT
AGGCATGTAA TGCAATTTAT CTGCAAAGAC GATAACAAAG CTTTTAGCGC TTATGTAGAC
CCCAAAGCCG TAGCGCCAAC CCATATAGTG CTGCGCGAAA AAACGCCTTT TAATCGTCAG
TCTAAAAATA TCACACCCCC AATAACACCA TTGAGCAGCC GCGAAAATTC CGTTGCATCG
CACGAAACCG AACCGGCTTA A
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| Protein sequence | MQPAHKQRET MLIIGAGLGG LSTGCYAQMN GYKTHLLEMH EIPGGCCTSW EKGKFTFDWC
VSWLLGSGPG NEMYDVWREI GGLDGKQIRH PEVFNIVTTA SGDSVRFYSD PEKLEKHLCE
ISPEDTKLIK NFCKGLRQFI KCLKVYPFLK PVGLMKWHEK ARMLASFIPH FNLIRKTIST
LMTDYSANFK SPILQEAFNF ILYEKHPNFP VLPFYFQLAS HATHSAGVPE HGSLGLARSI
EARFLKLGGK VSYNTKVEEI LVENNTAVGV RLSNGEKLFA DIIVSASDGY NTVMRMLKGK
YLNDTYRKLY TECITKPDLV FPGYFTLFLG LEKHFAEGEY CTTYILPEEL AEQLIGIRHA
SINVQFRNAL YPELSPRNTS IIYLSYFCDI APWRELAEGE EQVSRDFKGE HIHTLPVKRG
RAYQLAKKQV ANLLIDFLEK KFPGLRNAIS TRDIATPLTQ VRYTGNYDGS VLGWQPFVES
GESLEEEVKR SGPGLPGLQN FYFSGVWATT GGLIRAATAG RHVMQFICKD DNKAFSAYVD
PKAVAPTHIV LREKTPFNRQ SKNITPPITP LSSRENSVAS HETEPA
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