| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3711 |
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| Symbol | |
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| ID | 3966727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4698398 |
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| End bp | 4699708 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922808 |
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| Product | putative ATP-dependent RNA helicase |
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| Protein accession | YP_529178 |
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| Protein GI | 90023351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0132588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA GCGAGTTAGG GTTACACCAA TCACTGCAAA AAGCGTTAGA TAAATTAACC
TTTACCAAGC CTACTGATGT ACAGGTGCAA ACCATTCCTG CCGTTTTAGC CGGCAAAGAT
ATTATGGTGT CGGCCAAAAC CGGCAGCGGT AAAACGGCCG CTTTTTTGCT GCCTATGCTG
CACAAATTTT TAAACGATCC GCGCCCTAAT ACATCTACCC GCGCATTAAT TTTATTGCCT
ACCCGCGAGC TAGCTTTGCA AACCGTAAAA GCCTTCGAGC AATTCGCCGG TTACACACAA
ATTAAGGTGG GCTTAATTAT GGGCGGTGAA GCTTACAAAC ACCAAGTGGC TACTGTTCGC
AAAAACCCCG AGGTATTGGT AGCTACGCCA GGCCGCTTGG TCGAGCATAT TAAAAATGGC
AATGTCGATT TTTCCGATTT AGAGTTTTTA GTGTTGGACG AATCCGATCG CATGCTGGAT
ATGGGCTTTC AAGAAAACAT GCTTGCCATT GCCGCTGTGT GTAATGAAGA AAGACAAAAC
CTTTTGTTTT CGGCTACGTT AAAGCACAAG GGGATAGGTG GTATTACTGG CTTGTTACAA
GACCCTGTGC GCATCCAAGT AGATAGCGCT AAAGAAGGTC ATAGCAATAT CACCCAACAG
CGCGTATTCG CCGACGACGA CAGCCACAAA GAAAAACTAG TGGTTAAGCT TATTGCGGAA
GAAGACGCGC AGCGCGTAAT AGTTTTTTGT AATACGCGTT TGCAATGCCA GAAAGTGAGT
AATATTTTAC GCGCGAATAA ATTAGTGTCG GAATATATTC ACGGTGAGGT TACGCAAAGC
GACCGCAAGC AGGTAATGAA CCGGTTTATC GACGGTAAAA TTCGCGTGCT GGTAGCTACC
GATGTGGCTG CGCGCGGGTT GGATATAAAA GATGTAGATT TGGTTATTAA TTTCTCGGCA
GCGTTTACCG GCGATGAGCA TGTGCATCGC GTGGGCCGTA CGGGGCGCTC TGACAAAACC
GGTTTGGCAA TTACGCTTAT TAGCCCCAAA GAATTCAACC CTATGTCGAG TATCGAGCGC
TACTTAAAAA TTCGCTTAAT ACCGCGCAAG GTGAAAGGTT TAGAGGGTAC CTACAACGGC
CCCAAAAAAC TAAAAAGCTC TGGCAAAGCC GCCGGCCCCA AAAAGAAAAA AACCAAAACT
ACAGCCGGCA AACCCGGCAA AAAATTACCA AGTAAAAAAG ACCCCCAAAA GAAACGCTCC
GCCCCAAAAG TGAATTTGGG CGATGGCAGT GAGCCATTGT TTAAGAGATA G
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| Protein sequence | MEFSELGLHQ SLQKALDKLT FTKPTDVQVQ TIPAVLAGKD IMVSAKTGSG KTAAFLLPML
HKFLNDPRPN TSTRALILLP TRELALQTVK AFEQFAGYTQ IKVGLIMGGE AYKHQVATVR
KNPEVLVATP GRLVEHIKNG NVDFSDLEFL VLDESDRMLD MGFQENMLAI AAVCNEERQN
LLFSATLKHK GIGGITGLLQ DPVRIQVDSA KEGHSNITQQ RVFADDDSHK EKLVVKLIAE
EDAQRVIVFC NTRLQCQKVS NILRANKLVS EYIHGEVTQS DRKQVMNRFI DGKIRVLVAT
DVAARGLDIK DVDLVINFSA AFTGDEHVHR VGRTGRSDKT GLAITLISPK EFNPMSSIER
YLKIRLIPRK VKGLEGTYNG PKKLKSSGKA AGPKKKKTKT TAGKPGKKLP SKKDPQKKRS
APKVNLGDGS EPLFKR
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