Gene Sde_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3707 
Symbol 
ID3966723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp4691844 
End bp4692452 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content44% 
IMG OID637922804 
Productnegative transcriptional regulator 
Protein accessionYP_529174 
Protein GI90023347 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0908965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATAC CAAAGCATTT TAAGGAAGAA AACGACGATC TACTTTTCGA ATTTATTCGC 
AAGCACCCGT TTGCCACTTT AATCACCACG CATACCCATG GCGCAGAAGC TAATCACTTG 
CCGCTTTACC TCACAACCAG TAACGCAGGT AACGCAATAT TGCAAGGGCA TATTGCCGCC 
GCTAACCCTA TTTGGAAAAC AGCAGACCAA CAACAAGTAC TGGTTATTTT TCAAGGGAGC 
AATGCCTATA TAAGCCCAAA CTGGTACCCA ACAAAGGCTA TTGACGGCAA GGCGGTGCCA 
ACGTGGAATT ATGAGGCCGT GCATATTCGA GGTGAAATTA CGTTTATTCA CGACAGCGAT 
TGGAAAATTC AACTGCTCAA CGATTTAACC GCCGAGCACG AACAACACTT TAAGCAACCT 
TGGACAATTG CAGATGCACC CGAGGAATTT ATACGAAAAC TTCTACCTGC TATCGTAGGG 
TTTGAAATTA CCCTTGACGA TATTCAAGGC AAGTTTAAGT TAAGCCAAAA TCAACCTGTA 
GAAAACAAAC AGGGCATAGC TGCCAACCTA AGCAACCAAG GCGACCCTAT GGCCGATTTA 
ATCCGATAA
 
Protein sequence
MYIPKHFKEE NDDLLFEFIR KHPFATLITT HTHGAEANHL PLYLTTSNAG NAILQGHIAA 
ANPIWKTADQ QQVLVIFQGS NAYISPNWYP TKAIDGKAVP TWNYEAVHIR GEITFIHDSD 
WKIQLLNDLT AEHEQHFKQP WTIADAPEEF IRKLLPAIVG FEITLDDIQG KFKLSQNQPV 
ENKQGIAANL SNQGDPMADL IR