Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3701 |
Symbol | |
ID | 3966697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4686470 |
End bp | 4687171 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637922798 |
Product | hypothetical protein |
Protein accession | YP_529168 |
Protein GI | 90023341 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.162275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTAA CTCATATTGC TGCAGGCCTA TGTATCGCCG CAGGCGCCGT TCAAACCCAA GCTGCTACCA TTAGCGTTGA GATTACCAAT GCTACCCACA GTATTCACTT TACCCCCATT TTGGCCGTTG CCCATACCGA GGCGAACCAT CTGTTTCGCT TAGGCGAGGA AGCTTCCGAT GGCTTGCAAA TGATGGCCGA GGGCGGCTCG CTCGACGGCT TGCTAACCCT TGCAGACAGT ATAGGTGCAG ACACCGTAGC CAACCCGGCA GAAGGGTTAT TGGCGCCAGG CGCAATGACC ACAATTGCCA GCTGGGATAC CGGCGATGCC GACCGCCTAT CTATTGTGGC TATGCTGCTG CCTACAAATG ACGGCTTTGT GGGGTTAGAT TCATGGCAGA TACCCAGCGA ACCCGGCACC TACACCCTAA CCCTTAATGG CTACGATGCT GGCACCGAAG CGAATGACGA ACTGATAGTA GACGGTTCTG GCGCACCAGG CACCCCTGGC ATCCCTGCTA ACCCAAGCGG TAACAGCGGC ACCATGGGCA CAGGGGTAAC TAGCGAAGAA AGCAACACCA CGGTACATAT TCACCGCGGC AATGTGGGCG ACACCATGGT AGAAGGTGGC GCTAGCGATT TAGACTCCCG CGTTCACCGC TGGTTAAACC CCGTAGCCAA AGTGACCATT ACTGTTCACT AA
|
Protein sequence | MRLTHIAAGL CIAAGAVQTQ AATISVEITN ATHSIHFTPI LAVAHTEANH LFRLGEEASD GLQMMAEGGS LDGLLTLADS IGADTVANPA EGLLAPGAMT TIASWDTGDA DRLSIVAMLL PTNDGFVGLD SWQIPSEPGT YTLTLNGYDA GTEANDELIV DGSGAPGTPG IPANPSGNSG TMGTGVTSEE SNTTVHIHRG NVGDTMVEGG ASDLDSRVHR WLNPVAKVTI TVH
|
| |