Gene Sde_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3701 
Symbol 
ID3966697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4686470 
End bp4687171 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content55% 
IMG OID637922798 
Producthypothetical protein 
Protein accessionYP_529168 
Protein GI90023341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.162275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAA CTCATATTGC TGCAGGCCTA TGTATCGCCG CAGGCGCCGT TCAAACCCAA 
GCTGCTACCA TTAGCGTTGA GATTACCAAT GCTACCCACA GTATTCACTT TACCCCCATT
TTGGCCGTTG CCCATACCGA GGCGAACCAT CTGTTTCGCT TAGGCGAGGA AGCTTCCGAT
GGCTTGCAAA TGATGGCCGA GGGCGGCTCG CTCGACGGCT TGCTAACCCT TGCAGACAGT
ATAGGTGCAG ACACCGTAGC CAACCCGGCA GAAGGGTTAT TGGCGCCAGG CGCAATGACC
ACAATTGCCA GCTGGGATAC CGGCGATGCC GACCGCCTAT CTATTGTGGC TATGCTGCTG
CCTACAAATG ACGGCTTTGT GGGGTTAGAT TCATGGCAGA TACCCAGCGA ACCCGGCACC
TACACCCTAA CCCTTAATGG CTACGATGCT GGCACCGAAG CGAATGACGA ACTGATAGTA
GACGGTTCTG GCGCACCAGG CACCCCTGGC ATCCCTGCTA ACCCAAGCGG TAACAGCGGC
ACCATGGGCA CAGGGGTAAC TAGCGAAGAA AGCAACACCA CGGTACATAT TCACCGCGGC
AATGTGGGCG ACACCATGGT AGAAGGTGGC GCTAGCGATT TAGACTCCCG CGTTCACCGC
TGGTTAAACC CCGTAGCCAA AGTGACCATT ACTGTTCACT AA
 
Protein sequence
MRLTHIAAGL CIAAGAVQTQ AATISVEITN ATHSIHFTPI LAVAHTEANH LFRLGEEASD 
GLQMMAEGGS LDGLLTLADS IGADTVANPA EGLLAPGAMT TIASWDTGDA DRLSIVAMLL
PTNDGFVGLD SWQIPSEPGT YTLTLNGYDA GTEANDELIV DGSGAPGTPG IPANPSGNSG
TMGTGVTSEE SNTTVHIHRG NVGDTMVEGG ASDLDSRVHR WLNPVAKVTI TVH