Gene Sde_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3700 
Symbol 
ID3966696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4685452 
End bp4686261 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID637922797 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_529167 
Protein GI90023340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.163647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA GCTTTGGCAA ACTGGCCGCA GGGTTTAAAA ATTTATTAGG TAGTAATAAA 
AGCGCCGCAC CGGCTAGCGA TAACAAAAAA GCGGTAGAGG TGGTATCAGA AGAAACGCTT
AAAGCCCACG CGTTGCCGTT TAGCATCCCG CTAGAGTACG GCGTGGGCAC TAAAGTTAAC
GACACCCCCT CGGTTACAAT TTGTGAAGAT TTTTTAACGC AAGCCGAAGT GTTTCAAATC
ATTAAAGCCG CTGGCGATAA AATGCAGCGC GCTAGGGTGA GCTCTGGCAA AGAAGGCATT
GAAAGCGCCG GCCGCACGGG CAGTAACTGC TGGGTAGCGC ACGATCACAA CAAAGTTACC
CATGCGTTGG CAAAACGAAT AAGTAAACTA GTAGGTATTA GTTTACAAAA TGCCGAGTCT
TTTCAGGTTA TCCATTACGG TGTAAGCCAA GAATATTCAT CTCACTTTGA TGCCTGGGAA
TTTAATACCG AACGTGGCGA ACGCTGCATG GCGCGCGGTG GCCAGCGCTT GGTAACGTGT
TTAATTTATT TAAATGATGT GCCCGCCGGT GGGGGAACAG GGTTTCCTGA GCTAGATTTA
GAAGTGCAAG CTAAAAAAGG CCGCATGGTT ATATTCCATA ATTGTTACCC CGGTACTAAC
TATCGCCATC CGCACAGTTT GCACGGTGGG TTGCCGGTAG AAGAAGGCGA AAAGTGGGCG
GTTAACCTGT GGTTTAGAGA GGCCGATTAT TGGGCGGGCA CTAAAAAAGC GGCGGCCCCA
GCCCGTAAAA AATATGGGAA AGTGATGTAA
 
Protein sequence
MTSSFGKLAA GFKNLLGSNK SAAPASDNKK AVEVVSEETL KAHALPFSIP LEYGVGTKVN 
DTPSVTICED FLTQAEVFQI IKAAGDKMQR ARVSSGKEGI ESAGRTGSNC WVAHDHNKVT
HALAKRISKL VGISLQNAES FQVIHYGVSQ EYSSHFDAWE FNTERGERCM ARGGQRLVTC
LIYLNDVPAG GGTGFPELDL EVQAKKGRMV IFHNCYPGTN YRHPHSLHGG LPVEEGEKWA
VNLWFREADY WAGTKKAAAP ARKKYGKVM