Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3700 |
Symbol | |
ID | 3966696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4685452 |
End bp | 4686261 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922797 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_529167 |
Protein GI | 90023340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.163647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA GCTTTGGCAA ACTGGCCGCA GGGTTTAAAA ATTTATTAGG TAGTAATAAA AGCGCCGCAC CGGCTAGCGA TAACAAAAAA GCGGTAGAGG TGGTATCAGA AGAAACGCTT AAAGCCCACG CGTTGCCGTT TAGCATCCCG CTAGAGTACG GCGTGGGCAC TAAAGTTAAC GACACCCCCT CGGTTACAAT TTGTGAAGAT TTTTTAACGC AAGCCGAAGT GTTTCAAATC ATTAAAGCCG CTGGCGATAA AATGCAGCGC GCTAGGGTGA GCTCTGGCAA AGAAGGCATT GAAAGCGCCG GCCGCACGGG CAGTAACTGC TGGGTAGCGC ACGATCACAA CAAAGTTACC CATGCGTTGG CAAAACGAAT AAGTAAACTA GTAGGTATTA GTTTACAAAA TGCCGAGTCT TTTCAGGTTA TCCATTACGG TGTAAGCCAA GAATATTCAT CTCACTTTGA TGCCTGGGAA TTTAATACCG AACGTGGCGA ACGCTGCATG GCGCGCGGTG GCCAGCGCTT GGTAACGTGT TTAATTTATT TAAATGATGT GCCCGCCGGT GGGGGAACAG GGTTTCCTGA GCTAGATTTA GAAGTGCAAG CTAAAAAAGG CCGCATGGTT ATATTCCATA ATTGTTACCC CGGTACTAAC TATCGCCATC CGCACAGTTT GCACGGTGGG TTGCCGGTAG AAGAAGGCGA AAAGTGGGCG GTTAACCTGT GGTTTAGAGA GGCCGATTAT TGGGCGGGCA CTAAAAAAGC GGCGGCCCCA GCCCGTAAAA AATATGGGAA AGTGATGTAA
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Protein sequence | MTSSFGKLAA GFKNLLGSNK SAAPASDNKK AVEVVSEETL KAHALPFSIP LEYGVGTKVN DTPSVTICED FLTQAEVFQI IKAAGDKMQR ARVSSGKEGI ESAGRTGSNC WVAHDHNKVT HALAKRISKL VGISLQNAES FQVIHYGVSQ EYSSHFDAWE FNTERGERCM ARGGQRLVTC LIYLNDVPAG GGTGFPELDL EVQAKKGRMV IFHNCYPGTN YRHPHSLHGG LPVEEGEKWA VNLWFREADY WAGTKKAAAP ARKKYGKVM
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