| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3699 |
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| Symbol | nhaA |
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| ID | 3966695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4684112 |
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| End bp | 4685305 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922796 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_529166 |
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| Protein GI | 90023339 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.262179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAACTC GTAAGTCCCA CCCCATCAAA CGTTTTTTTG AGCAAGAAAC TGCTGGCGGT
ATTTTACTGA TTGTTGCAGC TGCACTGGCC ATGCTGCTTG CAAACAGCCC TTTTTACGGG
CACTACGATT TACTTATCGA TACCCCCTTT ATTATTTCCC TCGGTGATTT TGCATTAGAA
AAACCATTGT TGTTATGGAC TAACGACGGC CTTATGGCGG TGTTCTTTTT ATTGGTGGGT
TTAGAGTTAA AGCGCGAGTT GCTCGAGGGT GAGCTTTCCG ACCCGCGCAA AATTGCACTG
CCGGCTGTGG GGGCTATAGG CGGTATGCTT GTGCCAGCGT TAATTTACTG GTGGATAAAC
AAAGATAACC CTCTTGCCTT ATCTGGCTGG GCAATACCTG CCGCTACCGA TATTGCCTTT
GCGCTGGGTG TGCTGGCGTT GCTGGGTAGC CGAGTACCGG TAACCGTTAA AATATTTCTC
ACATCCATTG CGGTATTCGA CGATATAGGC GCAATTTTAA TTATTGCGTT TTTCTATACA
TCGAAAATTT CTATGCTTGC TCTAGTGGTG GCGGCTATAT GCTGTGCGAT TTTATTTATT
TGCAATCGCA GTGGCGTAAC CACTCTGCGT GCCTACCTGC TAATTGGTTT GGTTATGTGG
GTGGCGCTGT TAAAGTCTGG TGTGCACGCT ACTTTAGGCG GTGTAATACT GGCGTTTTTT
ATTCCAATGA CAGCCGCGCG CCCTCATCCA GAAATTAAAA TACCTTCGCC ATTAAAATTT
TTAGAGCACG AATTACACGC GCCGGTGGCG TTTTTAATTC TGCCTATTTT TGCCTTCGCT
AACTCAGGTA TTCGTTTTAT AGGCATGGGG GTAGAAGATT TTACCCACTC TGTACCAGTA
GGTATTGCCA GCGGCTTGTT TTTTGGTAAG CAGTTAGGCG TGTTTCTGTT TTGTGGTGTA
TGTGTATTGT TTGGCTGGCT AAAATTACCC AAAGGCATGC GCTGGGTGCA TTTGTACGGT
GTGGCTGTGT TGTGTGGTAT TGGTTTTACT ATGAGCTTAT TTATTGGCTC GCTAGCGTTT
CAAGAGAGTG GAATTAACAG CGTTATAGAT GAGCGCTTAG GCATTGTGTT CGGTTCGCTT
GTGTCTGCTG TATTAGGCTT TGTTGTGCTT AGAAGTGCTA AGCAAAAGGC TTAA
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| Protein sequence | MKTRKSHPIK RFFEQETAGG ILLIVAAALA MLLANSPFYG HYDLLIDTPF IISLGDFALE
KPLLLWTNDG LMAVFFLLVG LELKRELLEG ELSDPRKIAL PAVGAIGGML VPALIYWWIN
KDNPLALSGW AIPAATDIAF ALGVLALLGS RVPVTVKIFL TSIAVFDDIG AILIIAFFYT
SKISMLALVV AAICCAILFI CNRSGVTTLR AYLLIGLVMW VALLKSGVHA TLGGVILAFF
IPMTAARPHP EIKIPSPLKF LEHELHAPVA FLILPIFAFA NSGIRFIGMG VEDFTHSVPV
GIASGLFFGK QLGVFLFCGV CVLFGWLKLP KGMRWVHLYG VAVLCGIGFT MSLFIGSLAF
QESGINSVID ERLGIVFGSL VSAVLGFVVL RSAKQKA
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