Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3695 |
Symbol | gmk |
ID | 3966691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4680471 |
End bp | 4681148 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922792 |
Product | guanylate kinase |
Protein accession | YP_529162 |
Protein GI | 90023335 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.241605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTATG ATGTGTATTC CGCTTTCGCG ATTTTAAAAC ACGCTAACAC GAGCCGAGCA ATGACACCTA CTGGCACCCT TTACACCGTC TCTGCACCCT CTGGCGCAGG CAAAACCAGC TTGGTTTCTG CACTAATTGA TACCACTAGC AACATCATGG TCTCTGTTTC ACACACCACA CGCGCCAAGC GCCCTGGTGA GCAAGAAGGG GTGAACTACC ATTTTGTTAG CCACGAGCAG TTTGCCACTA TGGTGGAAAA CAACGCATTT TTAGAGCACG CGCAGGTGTT TACTAATTTT TACGGCACCT CTAAGCAATG GGTAGAAGAC ACCCTAGCCA AAGGCATAGA TGTTATTCTA GAAATAGACT GGCAAGGCGC GCAGCAGGTA CGCAAACTCA TACCTGCTGC AAAAAGCGTT TTTATTTTAC CGCCTTCGCG CGAATGCTTA CGCGAGCGCT TAACGGGCCG CGGGCAAGAC GACGAGAGCG TGATAGACGC CCGCATGGCA GAAGCCAAAA GCGAAATATC TCACTATGTA GAAGCGCAAT ATTTAATAGT GAACGACGAC TTTGACACTG CTTTGACCGA ATTTCGATCG ATAGTCGTTG CAAACCGTCT AGCCCTTGAA AAACAACAGG ACAAGCACCA AAGTTTACTA GAGAGCCTAT TGTCCTAG
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Protein sequence | MVYDVYSAFA ILKHANTSRA MTPTGTLYTV SAPSGAGKTS LVSALIDTTS NIMVSVSHTT RAKRPGEQEG VNYHFVSHEQ FATMVENNAF LEHAQVFTNF YGTSKQWVED TLAKGIDVIL EIDWQGAQQV RKLIPAAKSV FILPPSRECL RERLTGRGQD DESVIDARMA EAKSEISHYV EAQYLIVNDD FDTALTEFRS IVVANRLALE KQQDKHQSLL ESLLS
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