Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3681 |
Symbol | |
ID | 3966638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4664020 |
End bp | 4664835 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637922778 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_529148 |
Protein GI | 90023321 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000425443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0260006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAGT TACCCGAAGT AGAAACCACC CGCCGCGGTA TACTCCCCCA CCTAGAAGGC AAACGCGTTA AAGCCGTTAG CGTGCGCAAT CGCTCCCTGC GCTGGCCCAT CCCAGCAGAC CTAGCCCAAC AAATTCAAAA CAAAACCCTG CGCACTATTC ACCGGCGCGG TAAATACCTA CTGCTTGAGT TTGCCAATGG GCACGTTATT TGGCACTTGG GGATGTCTGG CAGTTTACGC ATTATTAAGG CCGACGAACC ACCCATGGTA CACGACCACG TGGATATAGC ATTTGGCGGT AACCTCGCCC TGCGCTACAC AGATCCGCGC CGATTTGGCG CCGTATTATG GACAAACGAA GCCATTCTCG AGCACAAGCT ACTCAACCAC CTCGGGCCAG AACCACTAAC CGACGCATTC AACAGCGCCT ACCTGTTCGA TAAAAGCCGC AAGCGCAGCC AAAGTGTTAA AACGTGGATT ATGGACAGCA AGGTAGTGGT TGGGGTGGGC AACATTTACG CTAACGAAGC TTTATTTAAC TCTGCTATTC ACCCACTAAA AGCCGCGGGT AAACTCAGCC AAAAGCAGTG CGATATTTTT TGTAGCGAAA TTAAAAGCGT GCTTGCCAAA GCCATAGAAC AAGGCGGTAC AACGCTAAGA GACTTTGTAG GCGGAGATGG TAAACCGGGT TATTTTGCGC AGGAACTAAA CGTATACGGC CGTGGGGGCA AGGCCTGTAA GAAATGCCGC AAACCTCTTA CAGAAAAAAA ACTAGGGCAG CGCACCACCG TGTACTGCAC CCATTGCCAA AAATAA
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Protein sequence | MPELPEVETT RRGILPHLEG KRVKAVSVRN RSLRWPIPAD LAQQIQNKTL RTIHRRGKYL LLEFANGHVI WHLGMSGSLR IIKADEPPMV HDHVDIAFGG NLALRYTDPR RFGAVLWTNE AILEHKLLNH LGPEPLTDAF NSAYLFDKSR KRSQSVKTWI MDSKVVVGVG NIYANEALFN SAIHPLKAAG KLSQKQCDIF CSEIKSVLAK AIEQGGTTLR DFVGGDGKPG YFAQELNVYG RGGKACKKCR KPLTEKKLGQ RTTVYCTHCQ K
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