| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3680 |
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| Symbol | |
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| ID | 3966637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4663762 |
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| End bp | 4663917 |
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| Gene Length | 156 bp |
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| Protein Length | 51 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637922777 |
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| Product | 50S ribosomal protein L33P |
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| Protein accession | YP_529147 |
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| Protein GI | 90023320 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0267] Ribosomal protein L33 |
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| TIGRFAM ID | [TIGR01023] ribosomal protein L33, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000213353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0395142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGATA AAATCCGTTT GAATTCAAGC GCAGGTACAG GTCACTTCTA CACTACGACC
AAAAACAAGC GCAACATGCC TGGCAAGTTC GAGATCAAAA AGTTTGATCC TGTAGCTCGC
AAGCACGTAA TGTACAAAGA AGGCAAAATC AAATAA
|
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| Protein sequence | MRDKIRLNSS AGTGHFYTTT KNKRNMPGKF EIKKFDPVAR KHVMYKEGKI K
|
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