| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3679 |
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| Symbol | rpmB |
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| ID | 3966636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4663497 |
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| End bp | 4663733 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922776 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_529146 |
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| Protein GI | 90023319 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000000185253 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0401063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG TTTGTCAGGT TACAGGTAAA CGCCCAGTAA CAGGCCACAA CGTATCTCAC
GCAAAAAACC ACACTAAGCG TCGTTTTTTG CCAAACTTAC ACTCTCACCG TTTTTGGGTA
GAGTCTGAGA AGCGTTTCGT TAAACTGCGT ATCTCTACTA AAGGTATGCG TATCATCGAC
AAGAAAGGTA TCGATACCGT TCTAGCTGAG CTTCGCGCTC GCGGCGAAAA AGTTTAA
|
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| Protein sequence | MAKVCQVTGK RPVTGHNVSH AKNHTKRRFL PNLHSHRFWV ESEKRFVKLR ISTKGMRIID
KKGIDTVLAE LRARGEKV
|
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