Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3672 |
Symbol | pyrE |
ID | 3966629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4655455 |
End bp | 4656096 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922769 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_529139 |
Protein GI | 90023312 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.145212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGCGT ACCAAAAAGA TTTTATTCAG CTGGCCTTAA AGGCCCAAGC CCTTAAATTT GGCGAATTTA CGCTTAAATC TGGCCGTGTA AGCCCTTATT TTTTCAATGC GGGCCAGTTT CAAACCGGCT CGGCACTCGC TAGCCTTGGC AGGTTCTATG CACAAGCCCT TGTAGACGCT GGCGTTGAAT TCGACATGAT TTTTGGCCCA GCCTATAAAG GCATCCCATT AGCGACCACT ACCGCCACCG CGCTGGCCGA CCATCACCAA AAAGACATGC CATTTGCTTA CAATCGCAAA GAAGTAAAAG CGCACGGAGA GGGCGGCACC CTTGTTGGCG CACCAATTAA AGGCCGTGTT GCCATAATTG ACGACGTGAT CACCGCAGGC ACAGCGGTTC GTGAAGTACT ATCTTTAATT GATGCCGCAG GCGCTAAACC CGCCGCGATA GTGGTAGGCT TAAACAGGCA AGAGAAAGGC CAAGGTGAGC TTTCTGCTAT TCAAGAGCTG GAACAAGAAA CCGGTGTACC GGTCATAAGT ATTATCAACC TAAATCATGT TCTGCAGTAC CTTGAAACCC AAGGTGACAG CGAAAACCTC GCTAAGGTTA CTGCCTATCG CCAACAATAC GGCGTAGAGT AG
|
Protein sequence | MQAYQKDFIQ LALKAQALKF GEFTLKSGRV SPYFFNAGQF QTGSALASLG RFYAQALVDA GVEFDMIFGP AYKGIPLATT TATALADHHQ KDMPFAYNRK EVKAHGEGGT LVGAPIKGRV AIIDDVITAG TAVREVLSLI DAAGAKPAAI VVGLNRQEKG QGELSAIQEL EQETGVPVIS IINLNHVLQY LETQGDSENL AKVTAYRQQY GVE
|
| |