| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3667 |
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| Symbol | |
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| ID | 3966624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4649482 |
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| End bp | 4650408 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922764 |
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| Product | hydroxymethylbilane synthase |
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| Protein accession | YP_529134 |
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| Protein GI | 90023307 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.135779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.514748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCCGAATCGC CACCCGCAAA AGTGAGCTCG CCCTGTGGCA AGCCAACGAT
GTAAAAGCCA AATTAGAAGC GCTTTACCCA AGCCTAGAGG TAGAGCTATT CCCTCTTGTG
AGCCGCGGCG ACAAGATTCT AGATGTGCCA TTGGCAAAAG TGGGTGGTAA AGGCTTATTT
GTAAAAGAGC TCGAGCACGC CCTGCTGGCA GATGAAGCCG ATATCGCCGT GCACTCCATG
AAAGATGTGC CCATGGAATT CCCAGAGGGC CTTGAGCTTG CAGTTATTTT AGAGCGCGAA
GACCCGCGCG ATGCGTGGGT GTCTGCGGGG TATGAAAATT TAGATGCGCT GCCAGCTGGC
GGTGTGGTGG GTACATCAAG CTTGCGCCGT CAAAGCCAAA TACTGGCGCG CAGGCCCGAT
ATAACCGTAA AGTTTTTACG CGGTAACGTA AACACACGTC TGGCTAAATT AGATGCAGGT
GAGTACGACG CCATTATCCT TGCGGCTGCC GGTTTGAAAC GCCTAAAGTT TGGCGATCGC
ATTCGCAGTT ATTTATCGCC AGAAGAAAGC TTGCCTGCGG GCGGGCAAGG TGCGGTTGGT
ATAGAGTGCC GCAGCGCAGA TAGTGAAACC CTAAAATTAT TACAAGCATT ACACCACACA
ATAACCGCCG AGCAAGTACT TGCCGAGCGC GCAATGAACC GCCGTTTAGA AGGGGGCTGC
CAAGTGCCTA TAGGTTGTTT TGCTGTTCAC CAAAATAACC AGCTTTGGCT GCGCGGCCTA
GTGGCAGACC CAGATGGTAG CAAAGTGATT TATGATGAAA TGACAGGCGC TGCCGCCGAT
GGCGAAAAAA TGGGCGTAGA GCTTGCAGAA AAATTATTGG CCGCGGGTGC CGACAAAATA
TTAAAAGCGG TATATGACAA CCAATAG
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| Protein sequence | MKKIRIATRK SELALWQAND VKAKLEALYP SLEVELFPLV SRGDKILDVP LAKVGGKGLF
VKELEHALLA DEADIAVHSM KDVPMEFPEG LELAVILERE DPRDAWVSAG YENLDALPAG
GVVGTSSLRR QSQILARRPD ITVKFLRGNV NTRLAKLDAG EYDAIILAAA GLKRLKFGDR
IRSYLSPEES LPAGGQGAVG IECRSADSET LKLLQALHHT ITAEQVLAER AMNRRLEGGC
QVPIGCFAVH QNNQLWLRGL VADPDGSKVI YDEMTGAAAD GEKMGVELAE KLLAAGADKI
LKAVYDNQ
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