Gene Sde_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3664 
Symbol 
ID3966621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4645851 
End bp4647062 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content46% 
IMG OID637922761 
Productmetal dependent phosphohydrolase 
Protein accessionYP_529131 
Protein GI90023304 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.421403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG CCCTGATTTA TTGCTTAATA TTATTGTGCT TAGGTGCCTC GCTAACCTAT 
TTAGTACAGC ACGACACTGG TTATATTCTT ATTAGCTATG GTGATACCAG CGTAGAAATG
CGCTTTTGGT TTGGCGTGTT TACCTTTTCT ATTGGTTTAC TTTTACTTTG GTGGTGCTTT
GGACTTATTC GTCGCGGGCT AACTGCATTT GGCGTAAGCC GCAGTTGGTG GAGCGAGAGC
AAACAAAAAC GCGCCGAGCG CCACACTCAG CGCGGCTTAA TTAATTTTGT AGAGGGCAAT
TGGCGAGCGG CAAAAAAAGA CCTTGTAGGC GCAGCCAAAT TATCTGATAA GCCGTTGGTA
CATTACTTGG CCGCAGCGCG CAGCGCTTAT GAATTAGGTG AAAAAGAAGA AACGCGTTTT
TTAATTCAGC AGGCCGAAAA ACACGCCCCC GAAAACGATT TGGCGGTGGC AATAAGTCAG
GCGCGCATTT TATTAATGGA AAAGCAATTA GAGCAATGCT TGGCTGTACT CACACGTGCG
CGCGCTAATC ACGGTGAGCA CCCCGTTGTA CTCGAACTGC TGTGTAGAAC AACCATTCAA
TTGCGCGATT GGACAAGCCT TGTAGAGCTG TTGCCATTAT TAGCGAAATA CAAAGTGTAC
GACGCTGAGG AACTAGCCCA ACTAAAACTT AACGCTTACC TCTCGCGCTT GCAGCACCTT
GCGGCTACCG CAAAAAAAGA AGGCGACCAC GTATTAATAC GCGATTTGCA TGCGTTTTGG
GATGCCGCGC CAAAAGAATT AAAGGCCAAT GAAAAATTAC TGTTTTGCTA TGCGCACGAG
TTAATAAAAG CCAAACTTTA CGACGAAGCC GAATCTATAT TGCGCGTTAA GCTGAAAAAA
TCTTGGCACC CTGAGCTTGT GAATTTGTAT GGCCGTTCGC GTACCGTTAA AAGTAAAGAT
CAGCTTACTC ATGCAGAAAG TTGGTTAAAA ACTCACCCAG AAGATGCAGT GTTACATTTG
GCCTTAGGTC GTATCGCAAT TCGTAATAAA CTATGGGGCA AAGCGCGCGG TTATTTAGAG
CAAAGTATAA AGCTGCGTGA AACACCACAA GCTTACGCTG AGCTGGCCGA GGTATTTGCT
ACCCTAGGCG AAACTAAGTT GAGTATAGAT TGCTACAAGC GCGGCTTACT GTTAAGTGCA
GGTGATAGCT AA
 
Protein sequence
MMRALIYCLI LLCLGASLTY LVQHDTGYIL ISYGDTSVEM RFWFGVFTFS IGLLLLWWCF 
GLIRRGLTAF GVSRSWWSES KQKRAERHTQ RGLINFVEGN WRAAKKDLVG AAKLSDKPLV
HYLAAARSAY ELGEKEETRF LIQQAEKHAP ENDLAVAISQ ARILLMEKQL EQCLAVLTRA
RANHGEHPVV LELLCRTTIQ LRDWTSLVEL LPLLAKYKVY DAEELAQLKL NAYLSRLQHL
AATAKKEGDH VLIRDLHAFW DAAPKELKAN EKLLFCYAHE LIKAKLYDEA ESILRVKLKK
SWHPELVNLY GRSRTVKSKD QLTHAESWLK THPEDAVLHL ALGRIAIRNK LWGKARGYLE
QSIKLRETPQ AYAELAEVFA TLGETKLSID CYKRGLLLSA GDS