Gene Sde_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3658 
Symbol 
ID3966615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4640058 
End bp4640417 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content45% 
IMG OID637922755 
Productglyoxalase/dioxygenase superfamily protein 
Protein accessionYP_529125 
Protein GI90023298 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.542995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.367409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC TAAACCATCA CAAAATTAAT TATGTGGAAT TTGCCACTAA AAATTTAAGC 
GCGAGCAAAT TATTTTTTCA AACCGTATTC AATTGGCAAT TTAAAGATTA CGGCCCCGAA
TACAGCGCCA TAGAAGAAGG CGGCCTCGAC GGTGGTTTTT ATCAAGCGGA TACTTGCGCC
CGCACAGAAA ACGGCAGCGC GCTGGTAGTG CTGTATAGCG CAAACCTAGA AGCAACACTA
CAAAGCGTGA CTGCGGCGGG CGGCATAGTG ATTAAAGAAA TATTTCCCTT TCCTGGTGGT
CGCCGCTTTC AATTTCTAGA GCCTGGCGGT AATGAGCTTG CTGTATGGTC TGATATATAA
 
Protein sequence
MPELNHHKIN YVEFATKNLS ASKLFFQTVF NWQFKDYGPE YSAIEEGGLD GGFYQADTCA 
RTENGSALVV LYSANLEATL QSVTAAGGIV IKEIFPFPGG RRFQFLEPGG NELAVWSDI