| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3651 |
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| Symbol | |
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| ID | 3966608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4627935 |
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| End bp | 4629137 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922748 |
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| Product | coproporphyrinogen III oxidase, anaerobic |
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| Protein accession | YP_529118 |
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| Protein GI | 90023291 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTA CAGATTACAG AGCCCCCGCC ATGCCCACAC CAACTGCCTT GCCGCCACTT
TCCCTTTACG TGCATATACC TTGGTGTGTA AGAAAGTGCC CCTATTGCGA TTTTAATTCG
CATGCGGCGC CCAGTGAATT GCCCATTGAC GACTACCTCG CCTGCTTAAA ACAAGATTTG
CTGCACGACC TAGATCAGGT GCAGGGGCGC AAAATTCACA GTGTATTTTT TGGCGGTGGC
ACACCGAGCT TGTTCCCCGG CGTGGCCATT GGCGACTTGC TGGCCTTTGT AGCAGATAAA
ATAGGCTTCG AAGCTGGGGC AGAAATAACT TTAGAAGCCA ACCCCGGCAC AGCAGAGCGC
GGCAACTTTA CCAGCTTGCG CATGGAGGGA GTAAACCGGT TGTCGCTGGG CGTACAAAGC
TTTAACGATG ACCACCTGCA GCGCTTAGGG CGTATTCACG GCCGTGATGA AGCACTCAAT
GCCTTCCAAT TAGCGCGCGA TGCGGGTTTT AACAATATAA ATATAGACCT AATGCACGGC
CTGCCCGAGC AAACGCCAGA GCAAGGGTTA AGTGATTTAC AACAAGCTAT TGGTTTGGGG
CCAGAGCATA TTTCGTGGTA CCAGCTTACC ATTGAGCCCA ACACCCACTT TTATTCCCAC
ACGCCGGTAT TACCCTTAGA AGACACGCTC GAGTCCATTC AAGAGCTAGG GCACGAAGCG
CTGCAAAGTG CAGGCTACCT GCGCTACGAA ACCTCTGCCT ATGCCCAAAA CGCCAAGCGC
TCAGCTCACA ACCTAAATTA CTGGCAGTTT GGCGATTACT TGGCCATTGG CGCCGGTGCG
CACGGTAAAA ACACCACGCT TACCCCCAAT GGCCTAGTAA TTAGCCGCAA CCGAAAAACG
CGTCTACCCA AAGATTACTT AGCCGCAGCC AAAAGTACCG CCAATGGCAA CCCATTTTGC
GCCAAGCAAA GCCTTATCGA CCCGAGCCAA CTACCGTTAG AGTTTATGAT GAACGCCCTG
CGGCTAATGG ATGGCGTTAA AGCAAGTACT TACTTCGAAA GAACGGGCTT AGCGTTAGAA
CCGCTAGCCC AAACACTTGC CGACCTGCGC GCACAGGGGC TGATGATTGA CAACCCCAAC
ACGCTAGCCA ACACAGAGCT TGGCCACCGC TACCTCAACG CCATCCTAGA GCGTTTTTTG
TAA
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| Protein sequence | MPTTDYRAPA MPTPTALPPL SLYVHIPWCV RKCPYCDFNS HAAPSELPID DYLACLKQDL
LHDLDQVQGR KIHSVFFGGG TPSLFPGVAI GDLLAFVADK IGFEAGAEIT LEANPGTAER
GNFTSLRMEG VNRLSLGVQS FNDDHLQRLG RIHGRDEALN AFQLARDAGF NNINIDLMHG
LPEQTPEQGL SDLQQAIGLG PEHISWYQLT IEPNTHFYSH TPVLPLEDTL ESIQELGHEA
LQSAGYLRYE TSAYAQNAKR SAHNLNYWQF GDYLAIGAGA HGKNTTLTPN GLVISRNRKT
RLPKDYLAAA KSTANGNPFC AKQSLIDPSQ LPLEFMMNAL RLMDGVKAST YFERTGLALE
PLAQTLADLR AQGLMIDNPN TLANTELGHR YLNAILERFL
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