| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3647 |
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| Symbol | |
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| ID | 3966604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4622947 |
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| End bp | 4623549 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637922744 |
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| Product | ribosomal protein L33 |
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| Protein accession | YP_529114 |
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| Protein GI | 90023287 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGG TAATACTCGC GAGCGGCAAT GCTGGCAAAC TGCGTGAGTT CCAACGTATT
TTGGCGGAAT TCGATTTAGA TGTGGCGCCA CAGTCGGCCT ACAACGTACC CGACGCCGAA
GAAACTGGGC TCAGCTTTGT AGAAAACGCC ATATTAAAGG CCCGCAACGC CTGTGCCCAC
ACAGGTTTTG CGGCAATCTC CGATGACTCG GGCATAGAAG TAGATGCGCT TAACGGCCAG
CCGGGTATAT ATTCCGCCCG CTTTAGTGGG CCAGGGGCAA CCGATGCCAA AAACAATGCC
CTACTGCTAG AAAAGCTCGA AGGTTTGCCC GAAGCTGAAC GCACCGCGCG CTACCAGTGC
GTGTTGGTGT ATATGCGCCA CGCCACCGAC CCCACACCTA TTATTTGCCA AGGGGCTTGG
GAGGGCACCA TCCTTACCGC GCCGCGCGGC GAAGGTGGCT TCGGTTACGA CCCTTTGTTT
TGGGTGCCAA GCCACCAGTG CGCCAGTGCG GAGCTGCCTG CAGAGGTAAA AAACAGTATT
TCCCATCGCG CAATTGCCAT GCAGGCGTTG TTAGCACAAA TTCGCGCGCA GCAGGCTAAA
TAG
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| Protein sequence | MQKVILASGN AGKLREFQRI LAEFDLDVAP QSAYNVPDAE ETGLSFVENA ILKARNACAH
TGFAAISDDS GIEVDALNGQ PGIYSARFSG PGATDAKNNA LLLEKLEGLP EAERTARYQC
VLVYMRHATD PTPIICQGAW EGTILTAPRG EGGFGYDPLF WVPSHQCASA ELPAEVKNSI
SHRAIAMQAL LAQIRAQQAK
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