Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3644 |
Symbol | metX |
ID | 3966601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4620725 |
End bp | 4621870 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637922741 |
Product | homoserine O-acetyltransferase |
Protein accession | YP_529111 |
Protein GI | 90023284 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2021] Homoserine acetyltransferase |
TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCTC CCTTTCCAGA AGATTCCGTA GGGTTAGTTA CACCGCAGCT CTTTCATTTT GATCAGCCGT TGGCACTTGC CAACGGCCGC TCGTTAGATT CGTACGAGTT AATGGTAGAA ACCTATGGCG AATTAAATGC AGAAAAAAGC AACGGTATAT TAATCTGCCA CGCGCTTTCT GGCAGCCATC ACGTGGCTGG CTATCACAGC GAAGACGACA AAAAACCCGG CTGGTGGGAA CACTACGTAG GCCCGGGCAA GCCAATAGAC ACCAACCGCT TCTATGTGGT GTGCATGAAT AACATTGGCG GCTGCCACGG CTCCACGGGC CCGCAATCTA TCAACCCCGC CACAGGTAAA CCCTGGGGCA GCAGCTTTCC GTTTTTGCGC GTGCGCGACT GGGTAGAAAC TCAAGTGCGT CTCGCCGACC GCCTCGGCAT TAACCAGTGG GCCGCAGTTG TGGGCGGCAG CCTAGGCGGC ATGCAAGCCA TGCGCTGGGC GCTCGAGCAC CCCAATCGCC TGCGCCACTG CGTTGTTATC GCCTCGGCAA TGAATTTAAC CGCACAAAAT ATTGCCTTTA ATGAAACCGC ACGGCAGGCC ATTCAAAGCG ACCCCAACTT TTTTAATGGC GATTACCTCG CACAAAGCAC CCTGCCAAAG CGCGGCTTAA GTGTTGCGCG CATGATCGGC CATATTACCT ATTTGTCTGA CGATGGCATG GGCAAAAAGT TTGGCCGCGA ATTGCGCAGC GGCAGTTTCG ATCGCGGCAA TGACCAACTG GTAGAATTCC AAATAGAAAG TTACTTGCGC TACCAAGGCA GCACTTTTTC TGAAGTATTC GACGCAAACA CCTATATATT AATGACCCGC GCATTGGATT ACTTTGACCT TGCGCGCGAG TACAACGGCG ATGCAGCCGA AGCGTTCAAA CAAGCTAGCT GCAAATTTTT AGTGGTTTCT TTCACCTCAG ACTGGCGCTT TGCCCCAGAG CGTTCGCGCG AGATTGTAAC CGCGCTTATG CGCGCAAACC GCGACGTAGT GTACGGCGAA ATTGACTCTG TGCACGGCCA CGATGCGTTT CTTGTGCCCA ATCAATTGCG TTACTGGGAG CTATTCTCTG CTTATATGAA CCGGGTGGAG GTGTAA
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Protein sequence | MPAPFPEDSV GLVTPQLFHF DQPLALANGR SLDSYELMVE TYGELNAEKS NGILICHALS GSHHVAGYHS EDDKKPGWWE HYVGPGKPID TNRFYVVCMN NIGGCHGSTG PQSINPATGK PWGSSFPFLR VRDWVETQVR LADRLGINQW AAVVGGSLGG MQAMRWALEH PNRLRHCVVI ASAMNLTAQN IAFNETARQA IQSDPNFFNG DYLAQSTLPK RGLSVARMIG HITYLSDDGM GKKFGRELRS GSFDRGNDQL VEFQIESYLR YQGSTFSEVF DANTYILMTR ALDYFDLARE YNGDAAEAFK QASCKFLVVS FTSDWRFAPE RSREIVTALM RANRDVVYGE IDSVHGHDAF LVPNQLRYWE LFSAYMNRVE V
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