| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3624 |
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| Symbol | |
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| ID | 3966581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4597477 |
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| End bp | 4598145 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922721 |
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| Product | carboxylyase-like protein |
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| Protein accession | YP_529091 |
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| Protein GI | 90023264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.701586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGACT GGAATAACAT TGATACCGTG CTGCTAGACA TGGATGGCAC GTTATTAGAT
TTGCACTACG ATAATTACTT TTGGCTAACT CACCTGCCAC AGCGTTATGC GCAAATACAT
AACACCACAC TCGAAGCTGC AACGGCATCG CTTACCGAGA TGATTGAATC GCGTGTAGGT
ACGTTGCAGT GGTACTGTTT GGATCATTGG TCTGAACTAG TAAACATGGA TATTCCCGCG
TTAAAACGCG AAATACAGCA TAAAATAGCC GTTCGCCCCT ACACAGAGCA GTTTTTACAA
GCTTTGCGCG CTATGGGCAA AAAGGTAGTG CTTATTACCA ATGCCCACCC CAAGGGGTTG
GATTTAAAAC TTGAAGTAAG CCAGATAGAC AGATGGCTGG ATATTGTTAT CTCATCCCAC
GAATTTAAAA CCCCCAAAGA AGATGCGGCT TTTTGGCAGC AGCTAAGCCA ACGCGAGGCG
TTCGACCCCA AGCGCACACT GTTTATAGAC GACACGGTAC GCATATTAAA AAGCGCTGAA
GACTTTGGCA TAGCGCACTT GGTGTGCATA AACCAGCCCG ACAGCCAAAA GCCTATAGTG
CGCTCGAACA CATATACCGA CATTGTTCAC TTCGATGAGA TAATGCCGCA GCTTAATAGC
GAAAAATAA
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| Protein sequence | MIDWNNIDTV LLDMDGTLLD LHYDNYFWLT HLPQRYAQIH NTTLEAATAS LTEMIESRVG
TLQWYCLDHW SELVNMDIPA LKREIQHKIA VRPYTEQFLQ ALRAMGKKVV LITNAHPKGL
DLKLEVSQID RWLDIVISSH EFKTPKEDAA FWQQLSQREA FDPKRTLFID DTVRILKSAE
DFGIAHLVCI NQPDSQKPIV RSNTYTDIVH FDEIMPQLNS EK
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