| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3597 |
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| Symbol | |
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| ID | 3966459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4556332 |
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| End bp | 4557459 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922694 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_529064 |
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| Protein GI | 90023237 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.549182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0916898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTTTA GACGGAAAAA GAAATCTCAG GACGAAACCG CGGCCGCCAA GGACGCAGTC
CAGCCCGCTA TTGACGAAAA TGCAGCCTCA GCAACCGGTG AACAGGCCCC TGCTGAGCAA
CCCGAAACGG GCGTGCCAAC TGTAGAGCCT TCGCTGCCAA ATAATGGCGA GCCAGAGCCT
CAATCCGAAA AACTGGGTGT GTTTGCGCGC ATTAAACGCG GTTTGTCGCG CACCAGCAAC
CAGTTTGCCA ATGGTTTAAG TAATTTATTG CTTGGTAAAA AAGCCATAGA CGATGAATTG
CTCGAAGAAA TCGAAACCCT GCTGCTAATG GCAGACGTGG GTATGGATGC AACAACCGAC
ATTATTGAAG ACCTGACTGA CCGCGTTGCA CGCAAGCAAC TTAACGATTC TGAAGCGCTG
TACGATGCAC TGCGCGAGTC GCTGGCCAAG CTATTACAGC AGGTAGAAGT ACCCTTCGAT
TTAGAGCAAA GCCATGCGCC ATTGCCATCC CCCTACGTTA TTTTGGTTGT TGGTGTGAAT
GGTGTGGGTA AAACCACCAC CATTGGCAAA CTGGCCAAGC GCTACCAAAA CCAAGGTAAG
TCAGTAATAT TGGCCGCTGG TGATACATTC CGTGCAGCTG CAGTAGAGCA ATTGCAAGTG
TGGGGCGAGC GCAACAAAGT GCCGGTTATT GCTCAGCATT CTGGTGCAGA TAGCGCCTCG
GTAATTTTTG ATGCGGTGCA ATCGGCACAG GCGCGCGGCA TTGATGTGCT TATAGCCGAT
ACCGCCGGCC GCCTACACAA CAAAAGCAAC CTCATGGAAG AGCTGGCCAA GGTTAAGCGC
GTAATGGGTA AGTTGGATAA CACAGCCCCC CATGAAGTGT TGCTGGTGTT AGATGCCGGT
ACCGGCCAAA ACGCCGTAAG CCAAGCAGAC CACTTTAAAA AGGCTGCCGA TGTAACGGGG
TTAGTGCTTA CTAAACTCGA TGGCACCGCT AAAGGCGGTA TTATTTTTGC GCTGAGTAAA
AAGCACAATA TTCCTGTGCG CTACATTGGC GTGGGCGAAA GCGTAGATGA CCTGCAGCCG
TTCGACGCCA AGAAATTTAC CGAAGCATTG TTTTCAACTA GTGATTAG
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| Protein sequence | MFFRRKKKSQ DETAAAKDAV QPAIDENAAS ATGEQAPAEQ PETGVPTVEP SLPNNGEPEP
QSEKLGVFAR IKRGLSRTSN QFANGLSNLL LGKKAIDDEL LEEIETLLLM ADVGMDATTD
IIEDLTDRVA RKQLNDSEAL YDALRESLAK LLQQVEVPFD LEQSHAPLPS PYVILVVGVN
GVGKTTTIGK LAKRYQNQGK SVILAAGDTF RAAAVEQLQV WGERNKVPVI AQHSGADSAS
VIFDAVQSAQ ARGIDVLIAD TAGRLHNKSN LMEELAKVKR VMGKLDNTAP HEVLLVLDAG
TGQNAVSQAD HFKKAADVTG LVLTKLDGTA KGGIIFALSK KHNIPVRYIG VGESVDDLQP
FDAKKFTEAL FSTSD
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