Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3591 |
Symbol | |
ID | 3966453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4550837 |
End bp | 4551979 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922688 |
Product | HAD family hydrolase |
Protein accession | YP_529058 |
Protein GI | 90023231 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000168113 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.23721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG TTATGTCGAA AAAAATTATT GCCCCGTTGG CTGTGGCTAT AGCGGCTATC ACATCAGCGG CGGATGCTGC AGACGTACGT GAAGGTATAG AGTTGGGCGC TGGCATTTCG CGTTTCTCGT TTGCGGATGA GGAAGTAATG GAAGGTGATT TTGGTGGTAA AGTATTTGCC GGATACCGCT TCGCCAATCC TTGGAGCATA GAACTTAACT ATGCGCGCGC AACGCCACAA TTAGATTCTG GCGACGGCAT TAAAATAGCG CAAACTTACG CTAGCGCGTT ATACCACTTT AAAACCGATG AGAGCTACGA GCCGTATATT TCTGTTGGCG CAGGCCAGCT TACTTTCGAC GGCATGGGTG TATCTGACGA CAGTAGCTTG GTGGGTGTGG GCGCCGGTAT TAAAGGTTAT ATTTCCGATC GCATTACCTT CCGCCCAGAC TTTTTTATTG CTAGTGCTCA AGAGCTAGAA AAACCGCATT TGCTTTCTAG TATTACTTTT AGCTACTTTT TCGGCAATGT GTCTTCATCT GCTGCGCCAA GTTCAGCTAA AACGGTTGCA GCAGCAAAAA TGGTAGATAG CGATAAAGAC GGCGTGCAAG ACGGCAACGA TGCCTGCCCA AATACTCCGG CAGGTGTAAA AGTAAATGCT AAAGGTTGCG CGCTGGATAG CGACCAAGAC GGCGTGGCAG ACCACAAAGA CAGCTGCCCA AATACAGCTA TGCACTTAAA GGTAGACGCT AAAGGTTGCC CGGTTCAATT GAGCGAATCT GTTTCTATTG ATTTAAAAGT TAATTTCGAT TCCAACAGCA GTGTTGTTAA GCCAGAATAT TTTGCTGAAA TCCGCAAAGT AGCCGACTTT ATGGCGCAGT ACGAAAACTC TGTGGTTGTT ATTGAAGGGC ACACAGATAC ACGCGGTGCC GCAGCTTACA ATAAATCACT TTCTCAAAAA CGTGCAGATG CAGTTGCTGC CGTTTTGGTA TCGGAAATGA ATGTAGCTAA GCGCAGAGTG ACATCAGTTG GTTATGGCGA AGAGCAGCCT ATAGCTGACG AAAGCACCCG TGAAGGTTTG GTGGCTAACC GTCGCGTAGT AGCTAAAGTG TCTGCTAGCG TAACGAAGCT TGAGCAAAAG TAA
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Protein sequence | MEFVMSKKII APLAVAIAAI TSAADAADVR EGIELGAGIS RFSFADEEVM EGDFGGKVFA GYRFANPWSI ELNYARATPQ LDSGDGIKIA QTYASALYHF KTDESYEPYI SVGAGQLTFD GMGVSDDSSL VGVGAGIKGY ISDRITFRPD FFIASAQELE KPHLLSSITF SYFFGNVSSS AAPSSAKTVA AAKMVDSDKD GVQDGNDACP NTPAGVKVNA KGCALDSDQD GVADHKDSCP NTAMHLKVDA KGCPVQLSES VSIDLKVNFD SNSSVVKPEY FAEIRKVADF MAQYENSVVV IEGHTDTRGA AAYNKSLSQK RADAVAAVLV SEMNVAKRRV TSVGYGEEQP IADESTREGL VANRRVVAKV SASVTKLEQK
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