Gene Sde_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3584 
Symbol 
ID3966446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4544914 
End bp4545399 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content51% 
IMG OID637922681 
Productflagellar basal body-associated protein-like 
Protein accessionYP_529051 
Protein GI90023224 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.298573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGTT CCGCAATAGC TCGTTTAAAG CAGATTGGCT GCGCTTGGTT GGTGGCAATT 
GCGCTGCTGT TTACTGGTTT AGCGCAGGCG CAAGATGACC CGCCCCCCGA AGAGGCGCCA
GCAGAGGAGG GGGCTGAAGG TGCCGAAGTG CCTGCTTCGG CCATTTATTT GCCAATTAAA
CCGCCATTCG TGGTGAATTA CGGTGGTGCT GGGCGGTTAA AGTATATTAA AACAGAGTTA
TCGGTACGGC TTTTGGATAC TACTGCCGCC AATGCGGTAA GGCATCATTT GCCCTATGTG
CGCAATAATC TCGTGTTGTT ATTTTCCAGT CAGACCGACG AGACTATGTC GTCTCAGGAG
GGGCGCGAGG CGTTGCGTAT TGCCTGTTTA AAAGAGATTC GCGAAATAAT TAAACGCGAG
GAGGGCGACG AAGTGGCGGC AGGCGTAATC GATGTATTTT TTAATTCGTT TATAGTGCAG
CGCTAA
 
Protein sequence
MSGSAIARLK QIGCAWLVAI ALLFTGLAQA QDDPPPEEAP AEEGAEGAEV PASAIYLPIK 
PPFVVNYGGA GRLKYIKTEL SVRLLDTTAA NAVRHHLPYV RNNLVLLFSS QTDETMSSQE
GREALRIACL KEIREIIKRE EGDEVAAGVI DVFFNSFIVQ R