| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3577 |
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| Symbol | |
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| ID | 3966439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4535967 |
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| End bp | 4536407 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922674 |
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| Product | ATPase |
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| Protein accession | YP_529044 |
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| Protein GI | 90023217 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.44565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAACAA AAAGCGGTAA ACAAAAAGGT TTCAGCCTTA TCGAGATTAT GGTGGTGTTG
GTAATTATCG GCCTGCTTAT GTCGATTGTG GGCCCGAAAG TTATGGGTGT ATTAGGTCAG
GGTTACAAGC AAAAAACCCG CGCCGATTTA AAAAACTTTC AGTCAGCATT AAAAATGTAC
AAGGTAGAAA ACTTCACTTA CCCAACTACC GAGCAAGGCT TGGATGCGTT GGTGAATAAA
CCTTCTACAT CGCCAGAGCC TCGCAACTAC CCACAGGGTG GATACATGGA TTCGATTCCT
AAAGATGCGT TTGGCAACGA TTATCAATAC CTAAGCCCAG CAGATTCTCA CCCTTACGAT
ATCTATACCC TAGGTGCAGA TGGGTTGGCC GGCGGCGTTG ACGAAAACGC AGATGTAAGT
GTGTGGGACG AAGTAAATTA A
|
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| Protein sequence | MRTKSGKQKG FSLIEIMVVL VIIGLLMSIV GPKVMGVLGQ GYKQKTRADL KNFQSALKMY
KVENFTYPTT EQGLDALVNK PSTSPEPRNY PQGGYMDSIP KDAFGNDYQY LSPADSHPYD
IYTLGADGLA GGVDENADVS VWDEVN
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