| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3569 |
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| Symbol | |
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| ID | 3966431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4529593 |
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| End bp | 4530603 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922666 |
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| Product | membrane protein |
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| Protein accession | YP_529036 |
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| Protein GI | 90023209 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.325217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACC CCACTCGCCT TGCTGTAGGT TTATTTATTT ATGTTGCGTT AGCCTCTAAC
GCATGGGCGC TATGGCATAG CGAAACCCAA GGAATAATGG GCACGGAAAT CTCCGTTACC
TTATGGGATG AAAACCCCGA GCACGCCAAG CTTGCCATTA CATCGGTAAT GACCGAAATG
GAGCGCATAA ACCAACTGCT TTCGCCCTAT CTAGAAACCA GTGAGCTGGC GCGCGTCAAT
CGCGATGCAG CTACAGCCCC GCAAAAAATC TCTGAAGAAT TTTATTGGCT AATCCATCAC
TCTTTACGCG TAAGTGCATT GAGCGGCGGA GCTTTTGATA TTACCTTCGC CTCTGTTGGT
TGGCGTTACG ATTATCGAGC ACATCAACAA CCGCAAGAAA ATGAAATAAA AAATTTATTA
CCCGCCATCA ACTATCGCTT GATTGTATTA GACGAAAAAA CACGCAGTGT ATTCTTTAAG
CATAAAAATG TGCGAATTGA TTTGGGGGGT ATTGCTAAAG GGTACGCGGT TGATAACGCA
ATTAAAATAC TGCGCACAAT GGGGGTCGAA CACGCTAGTG TTAGTGCCGG CGGGGATTCT
TATTTACTGG GCGACAGGCA AGGTAGGCCG TGGGTAGTGG GCATTAAAAA CCCAAGGGCA
GAGGATCCAG CCGCCAAAGC TGCGATTCGC ATTCCGTTAA CCGATACGGC TGTGTCTACC
TCTGGCGACT ACGAGCGCTA TTTTATTGAT GAGCATACTG GCGAGCGCGT GCACCATATT
CTAAACCCCA AAACCGGTAA GTCAGCTTCG GAAGTGACCA GTGTAACTAT ATTGGCGCCA
CGGGGGTTAG ATTCAGACCC GTTATCTACA ACAGTATTTG TACTGGGAGT AGAAAAAGGG
CTAGAGTTGG TCAACAGTTT GCAAGGAGTG GACGGCATAA TTATAGATCG CCAAGGTAAG
GTGCATTACA GCGCCGGCCT CGCGCCAGCC GAAGCTGCAG CTGCAGACTG A
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| Protein sequence | MRYPTRLAVG LFIYVALASN AWALWHSETQ GIMGTEISVT LWDENPEHAK LAITSVMTEM
ERINQLLSPY LETSELARVN RDAATAPQKI SEEFYWLIHH SLRVSALSGG AFDITFASVG
WRYDYRAHQQ PQENEIKNLL PAINYRLIVL DEKTRSVFFK HKNVRIDLGG IAKGYAVDNA
IKILRTMGVE HASVSAGGDS YLLGDRQGRP WVVGIKNPRA EDPAAKAAIR IPLTDTAVST
SGDYERYFID EHTGERVHHI LNPKTGKSAS EVTSVTILAP RGLDSDPLST TVFVLGVEKG
LELVNSLQGV DGIIIDRQGK VHYSAGLAPA EAAAAD
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