Gene Sde_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3566 
Symbol 
ID3966428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4524039 
End bp4526912 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content48% 
IMG OID637922663 
Productcoenzyme A biosynthesis protein 
Protein accessionYP_529033 
Protein GI90023206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.759534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGTC TTCTTCTAGC TAGTTTAGTG GTTGCCGCAA GCGGCTGTAG CATGTTTAGC 
GACGATGGGC CAAAGTATGG TCGCACCTTG GCAAGCTTAG AGGCCGCCTC AGTACCCGAC
GACTTAAACC CAGTGCCGCG GGTAGAGCTT GGCGAAATTG AAAAAAGTTA TCGCTCGGCG
TTAGAAGTGG CGATCGACCC TGAAATACGC CACAAAATTC TTATTCGTCT AGCCGATATA
GAAATGGCGC GCAGCGAAAA TCGCCAGCTT ACCGCCGAAG AACAGGGGGA GTTTTTTGGC
GGCGCTATTA CCATGTATCA AGAATTGCTT GAGCTAAACA AAGCGCGACA AGGTGTGGAT
GACACGCCAA CGAACGAGCG TATTTTGTAT CAGCTTTCTA AGGCTTATGC GTTAGATGGT
AAGCTCGATG AATCCAATCA AGTGTTGGGC GCTTTGGTTA GCGACCACCC AGAATCAGAT
TACGCTGCAG AAGCTGAATT CCGTCGTGCC GAGTTAGCCT TTAGCGAAGG TGACTATGCC
CTTTCGGAAA AACTGTACGC CCAGGTTATG GCGCGCGGCA AAGAAACCCC TTTCTACTTA
AACGCTGTGT ATATGCACGG TTGGTCGCAA TTTAAGCGCA ATAGTTATCG CGCGTCTATT
CGCTCCTTTA CCGAAGTGTT AGATACGGTT TTGGTCGAAG GGCAGTCGTC GGAAGAAATG
AGCAACAGCC AAAAAAATAT GGCAGCAGAC ACGTTGCGCA TTGTGGCTAT TGTGTTCTCG
TATATAGACG GTGCCGAAAC CATTACCGAG GTGTACAACA ATTTAGGCCA GCGTCACTAC
CAATATATGT TGTATATGCA ATTGGGTGAC TTGTACTTAG AGAAGCGCCG TTATCGTGAT
AGTGCCGATA CCTATCGCCA TTACGTAAAG CATTTCCCAA CTACAAACCA AGCGCCAGAC
TTTAGCGTAA AAGCCATTGA GGTATATAAC CTCGGCAATT TCCCAAGTGA AATTTTGCCG
GCTAAAGAAG AGTATGTGCA AAACTACGGC ATTAATAGTG AGTTTTGGGC ACAGCGCAGT
GAAGAGCAGC GCGCCCCGCT AAAGCCGTAT TTACGCCAGT ACATAGAAGA ACTTTCGAGC
TACTATCACA GCCGTGCTCA AGCACTTGTT ACTGCTGATG CAGAATACAA ACGGCTTAAG
GCGCGGGGCG AAAAGCCTGA ACGAGGTGAG TTGGTTAAAC CCGACGACGC ATTACCGGTT
TATTTAAAAG CGGCTGATTT TTATAATCAA TTCGTGCGCA CCTTCCCGCA GGATGAGAAA
ACGCCAGAAA TGGCCTTTCT TATGGGCGAA GCCTATTTTG AGGCAGGCTA CTACCCAGAG
GCGGCAGATG CATATGAAGC CGTTGCCTAC GATTACCTAG ATAAAAAACG CGGAGGTGAA
GCAGGCTACG CTGCCATCAT TACGCTCTCG AAACTGGTTG AACAAACTCA AGAGCAAACG
CAAGCAGCTT GGGCTAAGCG TAAAATTACC AGCTCGGTTA ATTTTGCCGA TTACTATCCA
ACGCACCCAC AAGCGGTTGC AGTGCTTACG CAAGCATCGG AAGATGTATT TAAAAGCGGT
GACCTAGATA GAGCCGTTAT TTTATCGTCA CGGGTTGTTG CTTGGCAGCC AGAACCTGAT
AAAAACTTAC GTAAAACTGC ACTGCTAGTG TTGGCGCACA GTCAGTTTGA TTTAAATGTT
TTCGACGCAG CCGAAACAGC GTATCGCCAA GTGCTTGCCC TGCAAGAGGC AAACGACCCA
GAGCGAACTG CAATTATTGA GCGTATAGCT GCAAGTATAT TCCGCTCGTC TGAATTGCAA
ATTGCCGGCG GCGATAAAGC TGGTGCTATT GATAGGCTGT TATCCATTCA AGCTGTTGCG
CCAGATAGCG ACATTGCCAT CAGCGCGCAG TACGACGCTT CGGTTTATCT TATGGAGCTA
AAGCGTTGGG ATGAAGCGGA AAATGTGCTT ACAACATTTA AAACCCGTTA CCCCACCAAT
AGTTTGTCGC GCGATATACC CGCTAAGCTC GCGTTTATTT ACCAAGAGTC GGAGCAGTGG
GATAAAGCCG CAGCGGTATT AGCCAAAATG GCTAGCGACG AATCGGACCC AGAGTTGCGC
CGCCAATCGC GCTACCTTTC TGCCGAGCTG TATGAAAAAT CTGGCCGGCC CGCAAAAGCC
ATCGAACAGT ATCGCGATTA CGCGCACAAC TACCCGCAGC CATTTGGATT GGCGACAGAA
GCGCGTTACA AGTTGGTTAC CCTGTACGAG CAAGCGGGTG ATTCGAGCAA ACGCCGGTTT
TGGTTAAAAG AATTAATTGC CGAGAATAAA AAAGCGGGCG ACAGCAAAAC CGCGCGCTCT
AATTATTTGG CGGCAATGGC AGCATCAGAA TTCGCCCAAG ATGATTATCT TGCCTTTAAT
CGCATTAAGC TAAATCAGCC GATTAAATCG AGCCTTAAAA AGAAAAAGGC AGCCCTCGAT
ACCGCGCTTA AATCCTATAA AGGGGTTATA GATTATGGCG TGGCGGAATT TGCAACTTTA
GCAAATTACC GCATTGGTGA AATTTATCGT CAGCTTAGTA GAGACTTGAT GGACTCCGAA
CGCCCGCAGG GTTTAGATGA ATTGGCGTTA GAGCAATACG AAATATTGAT TGAAGAGCAG
GCCTACCCCT TCGAAGAGAA ATCGATAGAT ATTCACGCGG CCAACGTTAA ACGCACCCGC
GCAGGTATTT ACGACGACTG GGTGAAAGAA AGCTTTGCGG CACTGGCAAA ATTACTGCCC
GCACGCTACG GCAAAAAAGA AGAAGCACTG GAGGTGAGTG ATGCTTTGTT CTAA
 
Protein sequence
MKRLLLASLV VAASGCSMFS DDGPKYGRTL ASLEAASVPD DLNPVPRVEL GEIEKSYRSA 
LEVAIDPEIR HKILIRLADI EMARSENRQL TAEEQGEFFG GAITMYQELL ELNKARQGVD
DTPTNERILY QLSKAYALDG KLDESNQVLG ALVSDHPESD YAAEAEFRRA ELAFSEGDYA
LSEKLYAQVM ARGKETPFYL NAVYMHGWSQ FKRNSYRASI RSFTEVLDTV LVEGQSSEEM
SNSQKNMAAD TLRIVAIVFS YIDGAETITE VYNNLGQRHY QYMLYMQLGD LYLEKRRYRD
SADTYRHYVK HFPTTNQAPD FSVKAIEVYN LGNFPSEILP AKEEYVQNYG INSEFWAQRS
EEQRAPLKPY LRQYIEELSS YYHSRAQALV TADAEYKRLK ARGEKPERGE LVKPDDALPV
YLKAADFYNQ FVRTFPQDEK TPEMAFLMGE AYFEAGYYPE AADAYEAVAY DYLDKKRGGE
AGYAAIITLS KLVEQTQEQT QAAWAKRKIT SSVNFADYYP THPQAVAVLT QASEDVFKSG
DLDRAVILSS RVVAWQPEPD KNLRKTALLV LAHSQFDLNV FDAAETAYRQ VLALQEANDP
ERTAIIERIA ASIFRSSELQ IAGGDKAGAI DRLLSIQAVA PDSDIAISAQ YDASVYLMEL
KRWDEAENVL TTFKTRYPTN SLSRDIPAKL AFIYQESEQW DKAAAVLAKM ASDESDPELR
RQSRYLSAEL YEKSGRPAKA IEQYRDYAHN YPQPFGLATE ARYKLVTLYE QAGDSSKRRF
WLKELIAENK KAGDSKTARS NYLAAMAASE FAQDDYLAFN RIKLNQPIKS SLKKKKAALD
TALKSYKGVI DYGVAEFATL ANYRIGEIYR QLSRDLMDSE RPQGLDELAL EQYEILIEEQ
AYPFEEKSID IHAANVKRTR AGIYDDWVKE SFAALAKLLP ARYGKKEEAL EVSDALF