| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3544 |
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| Symbol | |
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| ID | 3966386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4502505 |
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| End bp | 4502927 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922641 |
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| Product | general secretion pathway protein G |
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| Protein accession | YP_529011 |
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| Protein GI | 90023184 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000274638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACCC AAAGCGAAAC TCTACCCATA TTGTTATTGC GCGCTAGGGA GAAAGCGATA
TCGTACGTGC GGCCAGTACT CGCCGACTTG GATCTCACCG AACAGCAGTG GCGAGTCATT
CGCGCACTCT TTATGCACGA AGCGCTGAAC ACCCAGCAGT TGGCAGAGTC TACCTGCATT
CTGGGGCCAA GCTTGTCGCG CATTTTGGCT AAGCTGGATT CTGATGGGGT AATAGTGCGT
AAAGCAGATG CAGCGGACCA ACGTGTAGTA AATATACGCT TGTCTGCTAA AGGTAAACGA
ACTCACCAGC GTATATTTAA AAGCATGTCC AAGCAGTATC AGCAGTTTAG TAGCGATATG
GGGGCAGCGA AGGTGGAGAA ACTGAACAAC CTGCTTATGG AATTTGTAGG GCAGGTCGAT
TAG
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| Protein sequence | MTTQSETLPI LLLRAREKAI SYVRPVLADL DLTEQQWRVI RALFMHEALN TQQLAESTCI
LGPSLSRILA KLDSDGVIVR KADAADQRVV NIRLSAKGKR THQRIFKSMS KQYQQFSSDM
GAAKVEKLNN LLMEFVGQVD
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