Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3536 |
Symbol | |
ID | 3966378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4492189 |
End bp | 4493145 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922633 |
Product | hypothetical protein |
Protein accession | YP_529003 |
Protein GI | 90023176 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGCGG AAAAGCACCC ACCAGCAAGT AGTGAACTGG ACGCATTCGA ACAAGATGTA ATACATGGAT TAAGCCAGCA GCAAAAAACC TTACCCTGCC GCTGGTTATA CGACGACAGA GGCTCGCAGC TTTTCGAGCG CATCACGCAA TTACCCGAGT ACTACCCCAC TCGCACAGAA ACGGCCATTT TAAAAAATTG CGTTAGCGAC TTGGCACAGC ATATTGGCCC GCAGGCGGCA CTTATTGAAT ACGGCGCAGG AGCATCGGTA AAAACCCAAA TTTTATTAAA GCACCTTACC CACTTAAGTG CCTACGTACC TATAGATGTA TCTGGCGATT TTTTAGAAGA TACTGCGCAA CGGCTCCAAC AAACTTTCAG CCATTTAAAT ATCCAACCTG TAATTGCCGA CTTTACCAGC CCGTTTACGC TGCCAGCGCT CGGCAACAGC CGCTCAAAAG TGGGATTTTT CCCTGGGTCT ACCATTGGCA ATTTAAGCGA TGATGAAATC CATAGCTTTT TGACCGCGGC TCACCAACAC CTTGGCGACA ACCGACAATT TATTTTAGGG TTCGATTTAC ATAAATCAGC CGATATTCTT ATCCCCGCGT ACAACGACGC TGCGGGTGTA ACTGCCTGTT TTAATTTAAA CCTACTAGAC AGAATTAACC GCGAGCTTAA TGCGAACTTT TCTACCGGCG GTTTTAAACA CGACGCCCGC TGGAACGAAA ACGAGTCGCG TATTGAAATG CATTTAGTAA GTATTGCTAA GCAACGCATT ACTATTGCAG GTAAAACTAT AGAATTCGAA AAAGGCGAAT CAATTCACAC AGAAAATTCG CGCAAGTTTT GTTTAGATAG CATTAAAACC TTATGCCACA ACGCTAACTG GGCTATGCGA AAGGTGTGGA TGGATAGCGA CAACCTATTC GCTGTAGCGC TGATGGAACC CTTGTAA
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Protein sequence | MLAEKHPPAS SELDAFEQDV IHGLSQQQKT LPCRWLYDDR GSQLFERITQ LPEYYPTRTE TAILKNCVSD LAQHIGPQAA LIEYGAGASV KTQILLKHLT HLSAYVPIDV SGDFLEDTAQ RLQQTFSHLN IQPVIADFTS PFTLPALGNS RSKVGFFPGS TIGNLSDDEI HSFLTAAHQH LGDNRQFILG FDLHKSADIL IPAYNDAAGV TACFNLNLLD RINRELNANF STGGFKHDAR WNENESRIEM HLVSIAKQRI TIAGKTIEFE KGESIHTENS RKFCLDSIKT LCHNANWAMR KVWMDSDNLF AVALMEPL
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