Gene Sde_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3536 
Symbol 
ID3966378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4492189 
End bp4493145 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID637922633 
Producthypothetical protein 
Protein accessionYP_529003 
Protein GI90023176 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCGG AAAAGCACCC ACCAGCAAGT AGTGAACTGG ACGCATTCGA ACAAGATGTA 
ATACATGGAT TAAGCCAGCA GCAAAAAACC TTACCCTGCC GCTGGTTATA CGACGACAGA
GGCTCGCAGC TTTTCGAGCG CATCACGCAA TTACCCGAGT ACTACCCCAC TCGCACAGAA
ACGGCCATTT TAAAAAATTG CGTTAGCGAC TTGGCACAGC ATATTGGCCC GCAGGCGGCA
CTTATTGAAT ACGGCGCAGG AGCATCGGTA AAAACCCAAA TTTTATTAAA GCACCTTACC
CACTTAAGTG CCTACGTACC TATAGATGTA TCTGGCGATT TTTTAGAAGA TACTGCGCAA
CGGCTCCAAC AAACTTTCAG CCATTTAAAT ATCCAACCTG TAATTGCCGA CTTTACCAGC
CCGTTTACGC TGCCAGCGCT CGGCAACAGC CGCTCAAAAG TGGGATTTTT CCCTGGGTCT
ACCATTGGCA ATTTAAGCGA TGATGAAATC CATAGCTTTT TGACCGCGGC TCACCAACAC
CTTGGCGACA ACCGACAATT TATTTTAGGG TTCGATTTAC ATAAATCAGC CGATATTCTT
ATCCCCGCGT ACAACGACGC TGCGGGTGTA ACTGCCTGTT TTAATTTAAA CCTACTAGAC
AGAATTAACC GCGAGCTTAA TGCGAACTTT TCTACCGGCG GTTTTAAACA CGACGCCCGC
TGGAACGAAA ACGAGTCGCG TATTGAAATG CATTTAGTAA GTATTGCTAA GCAACGCATT
ACTATTGCAG GTAAAACTAT AGAATTCGAA AAAGGCGAAT CAATTCACAC AGAAAATTCG
CGCAAGTTTT GTTTAGATAG CATTAAAACC TTATGCCACA ACGCTAACTG GGCTATGCGA
AAGGTGTGGA TGGATAGCGA CAACCTATTC GCTGTAGCGC TGATGGAACC CTTGTAA
 
Protein sequence
MLAEKHPPAS SELDAFEQDV IHGLSQQQKT LPCRWLYDDR GSQLFERITQ LPEYYPTRTE 
TAILKNCVSD LAQHIGPQAA LIEYGAGASV KTQILLKHLT HLSAYVPIDV SGDFLEDTAQ
RLQQTFSHLN IQPVIADFTS PFTLPALGNS RSKVGFFPGS TIGNLSDDEI HSFLTAAHQH
LGDNRQFILG FDLHKSADIL IPAYNDAAGV TACFNLNLLD RINRELNANF STGGFKHDAR
WNENESRIEM HLVSIAKQRI TIAGKTIEFE KGESIHTENS RKFCLDSIKT LCHNANWAMR
KVWMDSDNLF AVALMEPL