Gene Sde_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3532 
Symbol 
ID3966374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4488197 
End bp4488964 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID637922629 
Producthypothetical protein 
Protein accessionYP_528999 
Protein GI90023172 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTTA AACTTGCCAC CGCACTGTAT TCGCTATCTA CCTTATATGC TTTATTTACC 
CTTAGCGCCT GCAGCTTAGC GGAGCAGGCG CCAGCTACAG CGGTACAACA TCAAAAAGAT
GACTGTGTTA TATTGGTGCA CGGCTTGGCG CGCACCCAGC GCTCTATGCA ACCAATGCAA
GATGCACTTA GCGCAGAAGG CTACAGGGTA ATAAACCACA GTTATCCATC GCGTAAACAA
ACCATTGGGC AGCTGGCCAA AACGCTAAAC AAGCCAATTG CCGAATGTAA AAAAACGCTC
GCGCCCAACG CTAAAATACA TTTTGTTACC CATTCGCTGG GCGGTATTTT ATTGCGAGCG
TATATAAAAG CCACACCACT AACAGAAATT GGGCGCGTGG TAATGCTTGG GCCACCCAAC
CGAGGCAGCG AAGTGGTTGA TACACTTAAA AATGTGCCGG GGTTTGAAAT TTTAAATGGG
CCTGCGGGCC AAGAACTTGG CACAAGCGAA ACCGCTTTAC CCAAAAAACT CGGCCCAGTA
AATTTTGAAT TAGGTGTAAT AGCAGGCACT CGCACGATAA ACCCGGTATT AAGCCAAATG
CTACCCAGCC CCAACGACGG CAAAGTAAGC GTAGAGAGCA CCAAAGTAGA AGGAATGAAA
CAACATATTA CCGTTGAAGC CAGCCACACT TTTATGATGC GCAATAACAA AGTAATTACC
GAGGTAAAAC AATTTATTGC AACAGGTAGT TTCAATAAGT ATAAATAA
 
Protein sequence
MRFKLATALY SLSTLYALFT LSACSLAEQA PATAVQHQKD DCVILVHGLA RTQRSMQPMQ 
DALSAEGYRV INHSYPSRKQ TIGQLAKTLN KPIAECKKTL APNAKIHFVT HSLGGILLRA
YIKATPLTEI GRVVMLGPPN RGSEVVDTLK NVPGFEILNG PAGQELGTSE TALPKKLGPV
NFELGVIAGT RTINPVLSQM LPSPNDGKVS VESTKVEGMK QHITVEASHT FMMRNNKVIT
EVKQFIATGS FNKYK