| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3525 |
|---|
| Symbol | |
|---|
| ID | 3966367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4479410 |
|---|
| End bp | 4479772 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637922622 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_528992 |
|---|
| Protein GI | 90023165 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAC GTTGGAATGA AGAGCAGCCA ATTTTTAGGC AGCTGGAGCA GCACATTAAA
TCGCTGATAT TAGATCAGGC GATTAAAGAG GGGGAGGCGC TGCCATCTGT ACGGGTGTTG
GCTGCGGAGT TCACTTTAAA CCCTCTAACG GTTTCTAAGG CACTGCAGGA GTTAGTGCAG
CAACAACTTA TTGAGAAAAG GAGAGGCTTG GGTATGTTTG TATGCGAGGG CGCAAAAAAT
AATTTATTGC AGGTAGAGCG TGAAAAATTT TTGCAGGAGG AGTGGCCAAA AATTAAAGCG
CGTATCGAGC GTTTAGGGTT GAACACCCAA GAAATATTAA AACAGGGAGA GGCCAAGAAA
TGA
|
|---|
| Protein sequence | MAIRWNEEQP IFRQLEQHIK SLILDQAIKE GEALPSVRVL AAEFTLNPLT VSKALQELVQ
QQLIEKRRGL GMFVCEGAKN NLLQVEREKF LQEEWPKIKA RIERLGLNTQ EILKQGEAKK
|
|---|
| |