| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3517 |
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| Symbol | |
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| ID | 3966359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4471636 |
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| End bp | 4472220 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922614 |
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| Product | hypothetical protein |
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| Protein accession | YP_528984 |
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| Protein GI | 90023157 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
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| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000273228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAG ACACATTAAG GCAAACCATG CGCGCCAAGC GCAACGCGTT AACGCCAAGC
CAACAAGCTT TTGCCAGTGA GCAGGTAGCA ACACACTTAG CTCAAAGCAG CGACTACCAG
CAAGCCACCC ACATCGCTTT TTATTTAGCT TGCGATGGCG AATTAGATTT AACCCCTGCC
CTCAAGCAAG CCCTTGCAGA TAACAAAGCC TGCTACTTAC CCGTTATTGC CCCCAACCGC
CAGTTGCGTT TTCGCCGCTA CAACGAAGGT TGCTCGTTAG TAACAAACCG CTACGGCATT
GCCGAACCGA GCGCAGACAA CCCAGAAATT CAACCCAACC GCTTAGACCT AGTACTTGCC
CCGCTTGTTG GTTTTGACAG TAACTTTAAT CGCTTAGGCA TGGGTGGCGG GTTTTACGAC
AGCACCTTTC GCCGCGCGCC GCAGCCTTTA GGCAAGCGCG ATAGACGAGC CGCGGTATTA
TTTGGCGTTG GCCATAGCGT TCAAAAAGTT GCGCAATTAG AAAGGGAAGC GTGGGATGTA
ACACTGGATG GTGTGCTGAC AGAAACAGGG CTGGACCTGC GTTAG
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| Protein sequence | MNKDTLRQTM RAKRNALTPS QQAFASEQVA THLAQSSDYQ QATHIAFYLA CDGELDLTPA
LKQALADNKA CYLPVIAPNR QLRFRRYNEG CSLVTNRYGI AEPSADNPEI QPNRLDLVLA
PLVGFDSNFN RLGMGGGFYD STFRRAPQPL GKRDRRAAVL FGVGHSVQKV AQLEREAWDV
TLDGVLTETG LDLR
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