Gene Sde_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3516 
Symbol 
ID3966358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4471036 
End bp4471329 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content49% 
IMG OID637922613 
Productcell division protein ZapA 
Protein accessionYP_528983 
Protein GI90023156 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000386953 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGATA GCAATCGAGT TTACGTAAAC ATACTGGATA AGGATTACCA GATTGCCTGC 
CCCGCCGAAG AGCGAGATGC ACTGCACCGC GCTGCAGAGG AGCTGGACGA ACGCATGCGC
GCCATTCGCA ATACAGGCAG TATTATTGGC TTAGAACGCA TCGCGGTGAT GGCAGCTTTA
AACCTGTGCC ACGAACTGCA ACAACAGCGC AAAAATACAG CTAAGCCGAA TGATGCCGAA
TCTATTTCGC GCATGATGCA AAAAATAGAT AAAGTACTCA CTTCGCACGA ATAG
 
Protein sequence
MTDSNRVYVN ILDKDYQIAC PAEERDALHR AAEELDERMR AIRNTGSIIG LERIAVMAAL 
NLCHELQQQR KNTAKPNDAE SISRMMQKID KVLTSHE