Gene Sde_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3504 
Symbol 
ID3966346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4459544 
End bp4459855 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content48% 
IMG OID637922601 
ProductZn-ribbon like domain-containing protein 
Protein accessionYP_528971 
Protein GI90023144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.887802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TGTATACCCA TCAAAACGGC ATTTTAGTAG GTAGTGTTAA GGCCTTACTC 
GAGCAGGCAA GCATTAAAGT GGAGATGAAA AACGAATACG CCTCCGGTGC GGTGGGCGAA
TTATCGGCAA TTGATTCGTG GCCTGAAATT TGGGTAAGCA ACCTAGATGA AGAGCGAGCC
AAAATCATTG TTGCTCGCTT GCAAGATAAC ACCCCACGCG AAGAGTGGGT GTGCGCTGCA
TGTAGCGAAA GTAACGATGC CGCTTTCGAG GTGTGTTGGC AGTGCCAAGC CTTTCCACCA
ATTGCACCTT AA
 
Protein sequence
MKLVYTHQNG ILVGSVKALL EQASIKVEMK NEYASGAVGE LSAIDSWPEI WVSNLDEERA 
KIIVARLQDN TPREEWVCAA CSESNDAAFE VCWQCQAFPP IAP