| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3490 |
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| Symbol | |
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| ID | 3966332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4444620 |
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| End bp | 4446185 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922587 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_528957 |
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| Protein GI | 90023130 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0312462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG CTAATTTAGG TTGTATTCAA GTGGAAAGTA CTCATAACAA GTGGGCAGTA
GCGCTATCGG TTTCGATGGG CGGAGTTATG TCATCGCTCG ACACTTTTAT CCTTTATGTG
GCTACGCCAA ACCTTCGCGG AGTATTTTCA GCCACTGTGG CTGAGGTTAG CTGGGTAAGC
ACCAGCTACG CGATCGCATC TATGATGTGC ATGTTTTTAT CTGGCTGGTT TGTAGATCGC
CTAGGTAGTA AGCGGGTATA CCAAGCGGGT TTGGTGTTGT TTGTTATCGG CTCAGCGCTG
TGTGCTATGG CGACGTCTCT GGAGCAATTA ATTTTATATC GCGTTATTCA AGGTTTGGGA
GCAGGTATTC TTCTGCCGGT GGAAGGCGTG ATTTTGCGCA GAACCTTCCC GCCGGTGCAG
CACGGCCTGG TTATGGGGCT TTACGGTACG TCCATTATGT GTGGCCCAGC ATTTGGCCCC
ATGTTGGGCG GTATTCTTAT CGATCAGTTC AGCTGGCACT TTATATTTAT CGTGAATATT
CCTATTGGCA TTATCAGCTT TGTAATGGTT AGGCATTATT TGATCGATGA TCCAATCGGT
GCAGACACCC CTAAGCGCAC ATTCGATGCC CCAGGTATTT TATGGCTGCT ATTTGGCGTT
GTGGGTACCG TGTGGTTGCT TGAGCGTGGC GATCGCACCT ACTGGTTTGA AGATACTCAA
AATGTAGTAC TACTTGTGGT TGCACTCGCT TCTTGGGCAA TGCTTTGTGC CCACTCCCTT
ACCATCAAGC AACCTCTTCT AGACCTCAAA GTGCTGAAGC ATAAAACCTT TACTGCGGCG
AACAGCTTGA ACTTTCTCGC TGCTTTCATG ATTACTGGCA CGCTGTTCGT TTTGCCTATT
TACATGCAAG AGCTGCTAGG TTTTTCGCCA ACACAAGCGG GCACCACCAT GGCGCCGCGA
GCGTTGGTAA TGATGTTGGC TTTTCCCCTT GTGGGGTGGC TATTTAATCG TGTTCCCATG
CGCCTGCTTA TTACAACTGG GTTGGTATTA GGGATTGGTA GTGGGGTGAT GATGGCCGGC
TTTACTTTCG AAACCGGTTG GCACGATATG ATTTTGCCGC AAATCATTCA GGGCTTAGGG
GCAGCCTTTA TTTTGGGGCC GGTTACCACT GCTGCGCTTA TCAGTATTCC CAAGGCAACC
ATGCCAGCTG CTGCTGCTTT GGAATCTACC ACCCGCTTAT TGGGCAGCAC ACTTGGTATT
GCGGTGTTTG CCAGCTTGAT AACCCATTAC GAGCTGCGCA CATGGGAGCT GCTTCGCCAC
AACGTGACTT TATCTAGCAC TGTTTTATAT AAGCGCTTTG GTGGTGTTGT TGAGTTTTAT
TACTCTGAAA CAAGTAGCCA GTTGCACGCG CTGGAAAAAG CTTACCGCGC ACTAAATGGT
AGGGTAACCG AGCAAGTGCT CTCGATAACC TATATGAACT TATTTCAACT TATAACAGTA
GGATTTATAG CGATGCTAAT TATCTCTGCT TTTATTTCAC TTAAAAAACA GCAGCAAGTT
GCTTAA
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| Protein sequence | MSQANLGCIQ VESTHNKWAV ALSVSMGGVM SSLDTFILYV ATPNLRGVFS ATVAEVSWVS
TSYAIASMMC MFLSGWFVDR LGSKRVYQAG LVLFVIGSAL CAMATSLEQL ILYRVIQGLG
AGILLPVEGV ILRRTFPPVQ HGLVMGLYGT SIMCGPAFGP MLGGILIDQF SWHFIFIVNI
PIGIISFVMV RHYLIDDPIG ADTPKRTFDA PGILWLLFGV VGTVWLLERG DRTYWFEDTQ
NVVLLVVALA SWAMLCAHSL TIKQPLLDLK VLKHKTFTAA NSLNFLAAFM ITGTLFVLPI
YMQELLGFSP TQAGTTMAPR ALVMMLAFPL VGWLFNRVPM RLLITTGLVL GIGSGVMMAG
FTFETGWHDM ILPQIIQGLG AAFILGPVTT AALISIPKAT MPAAAALEST TRLLGSTLGI
AVFASLITHY ELRTWELLRH NVTLSSTVLY KRFGGVVEFY YSETSSQLHA LEKAYRALNG
RVTEQVLSIT YMNLFQLITV GFIAMLIISA FISLKKQQQV A
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