| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3489 |
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| Symbol | |
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| ID | 3966331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4443407 |
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| End bp | 4444588 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637922586 |
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| Product | putative secretion protein |
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| Protein accession | YP_528956 |
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| Protein GI | 90023129 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0544122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT TGAATCCATT ACTTTCCGAT CATCGTTATC AAGTTGGGCT TGTTATCTTT
GTTGTGGTTC TCACTATTAG TTCGTGGAGC TACGCTACGC GCAATGTTGA GTCCACCGAT
AATGCAACGG TGCAATGCGA TCTTATTGAT GTGGTATCTG AAGTAAACGG TGTAATAGAT
ACTATTACTT TTACCGATGA TCAGTGGATA GAAAAAACGG GTTTGGCTGT AAAAATAGAA
GATAGCTTAT TTGTTTCCGA GCTAAAGCGG TCTGAGGCCG CATTAGCTAT CGAGCAGGCA
AGCTACATTG ATGCTCAAAA CAACCTTAAA ACCATAATGG TTGAGTTGGA TACCAATATA
GAAAGGGCTA AATCTTCAAA GCAATCGGCA CAGTCTATTG TTGATTCTAT GGATTCCTCC
ATCGAGGAGG CGCGTCAGGA GTTAATCGCG TCTAAAAAAG ATATGACCTT CTTGGAAGAA
AACTTCAATC AAATAAGTCG GCTATATAAG CAGCAAATGG TATCTGAGAC AGATTACAAA
AACGCCAAGC GCCAGTTTGA ATCCAAGCAG GCCATGCACT CATCTATAGA ATCTAAAATA
AACCGTTTAA CAAGTTTGCG TGACGTAGAA ACAAATAACG TATATTTAGC GAACAAAAAT
TTAGAAGCGT TGGAGACAAC TAAAGATAGC CAGCTAAAAA GTGCAAAAGC CAAAGTAGAT
ACCGCCTTGG CCCGTGTGAA TGTGGCGCAA GCTGAATACG ATTTGGCGGC TCTTAATTTA
AAGCGAACCA ATATTCTGGC AAAAAGGTCG GGTTTTATTA CTAATCGACG AATATCTAGT
GGTGACTACA TTGAGATAGG GCAGCCTATT GCGAGTATTG TTTCCTGCCA AGATAATCCC
TGGATACAGG CAAACTTTAA AGAAACGCAG GTAGGTAAAA TGCAAAAAGG GCAAAAGGTT
GAATTTACGA TAGATACCTA CCCAGAAATA GTATTCGAGG GGTATTTAGA GAGTATATCT
AGTGGTAGTG GTTCCACATT TAGTGTTTTA CCGCCAGAAA ACGCCACAGG AAATTTCACC
AAGGTGGTAA AAAGAATGCC GGTAAAAATA TCAATTGCAG AAGACAAGGG CGCAATATTT
AGAATAGGAG CCTCTGCGAA TGTAAAAGTA TTTACCCGCT GA
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| Protein sequence | MKYLNPLLSD HRYQVGLVIF VVVLTISSWS YATRNVESTD NATVQCDLID VVSEVNGVID
TITFTDDQWI EKTGLAVKIE DSLFVSELKR SEAALAIEQA SYIDAQNNLK TIMVELDTNI
ERAKSSKQSA QSIVDSMDSS IEEARQELIA SKKDMTFLEE NFNQISRLYK QQMVSETDYK
NAKRQFESKQ AMHSSIESKI NRLTSLRDVE TNNVYLANKN LEALETTKDS QLKSAKAKVD
TALARVNVAQ AEYDLAALNL KRTNILAKRS GFITNRRISS GDYIEIGQPI ASIVSCQDNP
WIQANFKETQ VGKMQKGQKV EFTIDTYPEI VFEGYLESIS SGSGSTFSVL PPENATGNFT
KVVKRMPVKI SIAEDKGAIF RIGASANVKV FTR
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