| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3477 |
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| Symbol | |
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| ID | 3966319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4430717 |
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| End bp | 4432651 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922574 |
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| Product | hypothetical protein |
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| Protein accession | YP_528944 |
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| Protein GI | 90023117 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.3315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0173561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC ATGCCCCGCT ATTTATGGCA ATATTGATTG GAGTCGGCAT TCTATTTGGT
GTGCTGCTTG GTGTAATGGC TCTGTTCAAA GCCTTCTACG TAAAAGTAGA ACAAGGCGTA
GCGTTAATAA AAAATGACAT GAGCGCACGC CCAAAAGTGT TCTTTACCGG TGCCTGGGTA
TTGCCGGTTA TCCATAAAAA GGAATTGATG CGTATTTCGC TTATTACCCT AGAGGTGGAT
AGGCGCGGTA AAGAAGGTCT AATTTGTGCC GATAATATGC GAGCAGATAT AACTGTTGCG
TTTTATTTGC GCGTAAACGA AACGCCAGAA GATGTTCTAA AAGTGGCTAA GTCGTTAGGT
GCTAATCGTG CATCGGATAA AAACGCTGTT CACGAATTAT TTAATGCTAA ATTCTCTGAA
GCATTGAAGA CCGTAGGTAA GCAAATAGAT TTCGTTAAAT TGTTTGAAGA TCGCCAGCAA
TTTCGCGATA AAATTATTGA AGTAATTGGC AACGATCTAA ACGGCTACGC TCTAGAAGAT
GTTGCAATTG ATTACTTAGA GCAAACGCCA AAAAGCGCGC TGGACCCAGC AAATATTCTT
GATGCAGAAG GTATTCGCAA GATTACCGAG CTAACAGCTA CGCAAAATAT TCAAACCAAC
ATATTTTCGC GCGACGAAGA GCTGGCCATT AAGAAAAAGA ACGTATCTAC CGTAGAAGCG
ATGCTAGAGC TTGAGCGTCA GCAGGCAGAT GCCGAAGCTC GCCAAAAGCG TGAGGTGGAA
ACCATTAAAG CGCGTGAAGA AGCGGAAACT AAACGCGTGC AAGAAGAAGA GCGCAAAAAG
GCAGAAATGG CCACCATTAT GGTGGAGCAA GATCTGCAAG TGCAATCGGA AAATCAAAAG
CGTGAAATTG AAGTGGCAGA GCAAAATCGC CAGCGCGCTG TAGTGATTGA AATAGAAAAA
GTAACGCGAG CAAGAGATCT CGAAGTTGTA GCGCGCGAAC GCGAAGTAGA ATTGCAGCGA
ATTGAAGCCG AAAAAGCAAT TGAAGTAGAG AAAAAAGAAA TTGCTAATGT TGTGCGCGAG
CGAGTAGCGG TAGATAAAAC TGTTGCTATC GAAGAAGAGA AAATCAAAGA AGTGCGTGAA
GTATCTGAAG CTGACCGCAC TAAGCAGGTA CAAGTGCTTG CAGCAGAAGC GAAAGCGGAA
GAAGAGAAAG TTAAAATAAC CAAAGATGCA GAGGCACAAG AAGCTGCTGC CAAACATAAA
GCCATTGAAA TAACTACTCT AGCGCAAGCT AATCTCGAAG CCGCAGCAAA AGAAGCGGAT
TCGAAGAAGA AATTGGCAGA GGGTACTCAG GCGGAAGAAG CTGCACACGG CTTAGCAGAA
GCGAAGGTGC AAGAAGCCAA AGCCGATGCA ATGGAGAAAG AAGGACTGGC CACAGCGCGA
GTTACTCAGT CGCAAGGTGA ATCTGAAGCG AATGTAATTG CAATGAAAGG CGACGCCGAA
GCGAAAGCGG TACGCGAAAC CGGTTTGGCC AAAGCAGACG TTACGCGCGA GCAATTTAAA
GCTGAAGCAG ATGGCTTAGT CGAGAAATTT GACGCGATGG GCAAAATGAG CGAAAGCGCG
CGCGAGCACG AAGAGTTCCG CATGACGCTA GAAACGGCCT TCCAAGAAGC ATTGGCGTCT
ATCGAAGCTG GTAAAGAAAT CGCGAAAGAA AATGCCGAAG TATTGGCAAC TGCACTGCAA
AAAGCACACA TCGATATTGT GGGCGGTGAA GAGCACTTCT TTGATAACTT TGCCAAGTCA
CTTTCTATAG GTAAGGCGGT AGATGGCTTA GCGGGTAAAA GCGGCACCAT ACAAGCGTTA
CTTGAAAAAG TAATGACGAT GTCTGCCGGT GCTCAGGCCG CAACCAAGGC ACCAGTGGTA
GAAACACAGC AATAG
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| Protein sequence | MAEHAPLFMA ILIGVGILFG VLLGVMALFK AFYVKVEQGV ALIKNDMSAR PKVFFTGAWV
LPVIHKKELM RISLITLEVD RRGKEGLICA DNMRADITVA FYLRVNETPE DVLKVAKSLG
ANRASDKNAV HELFNAKFSE ALKTVGKQID FVKLFEDRQQ FRDKIIEVIG NDLNGYALED
VAIDYLEQTP KSALDPANIL DAEGIRKITE LTATQNIQTN IFSRDEELAI KKKNVSTVEA
MLELERQQAD AEARQKREVE TIKAREEAET KRVQEEERKK AEMATIMVEQ DLQVQSENQK
REIEVAEQNR QRAVVIEIEK VTRARDLEVV AREREVELQR IEAEKAIEVE KKEIANVVRE
RVAVDKTVAI EEEKIKEVRE VSEADRTKQV QVLAAEAKAE EEKVKITKDA EAQEAAAKHK
AIEITTLAQA NLEAAAKEAD SKKKLAEGTQ AEEAAHGLAE AKVQEAKADA MEKEGLATAR
VTQSQGESEA NVIAMKGDAE AKAVRETGLA KADVTREQFK AEADGLVEKF DAMGKMSESA
REHEEFRMTL ETAFQEALAS IEAGKEIAKE NAEVLATALQ KAHIDIVGGE EHFFDNFAKS
LSIGKAVDGL AGKSGTIQAL LEKVMTMSAG AQAATKAPVV ETQQ
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