| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3455 |
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| Symbol | ribH |
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| ID | 3966278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4396470 |
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| End bp | 4396937 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922552 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_528922 |
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| Protein GI | 90023095 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00267729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCATTA AAGTAATTGA AGGGGATTTT AAAGCCTCTA CCGGCAAATA CGCATTGCTA
GTAAGTCGTT GGAACAGTTT TGTTGTTGAG CATTTAAAAG ATGGCGCTAT AGATACATTG
CGTCGTCACG GTATTAGCGA CGAAAACATC GAAGTTATCT ACGCGCCTGG CGCATTCGAG
TTTCCATTGG CTGCGCAAAA GCTAGCAGAT GCAAAACGCT ACGATGCCAT TATTGCATTG
GGTGCAGTTA TTCGCGGTGG TACACCTCAC TTCGATTACG TTGCCGGCGA ATGCACCAAA
GGGTTAGCGC AAGTATCGTT AAACGCAGGT TTGCCCATTA CGTTTGGCGT ACTTACTGTA
GATTCCATCG AGCAAGCCAT AGAGCGCTCG GGCACTAAAG CAGGTAACAA AGGCGCAGAA
GCGGCTTCTA CTGCATTAGA AATGGTTTCT CTTATTAGCA AAATATAA
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| Protein sequence | MTIKVIEGDF KASTGKYALL VSRWNSFVVE HLKDGAIDTL RRHGISDENI EVIYAPGAFE
FPLAAQKLAD AKRYDAIIAL GAVIRGGTPH FDYVAGECTK GLAQVSLNAG LPITFGVLTV
DSIEQAIERS GTKAGNKGAE AASTALEMVS LISKI
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