| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3451 |
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| Symbol | |
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| ID | 3966274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4393776 |
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| End bp | 4394447 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922548 |
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| Product | hypothetical protein |
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| Protein accession | YP_528918 |
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| Protein GI | 90023091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000912858 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAAGCTAC TAAAAAGCAA ATGGAATTTT GCATGTTTAT TGGTAAGTGT TATTTGGCTC
GCAAGCGTAA ACGCAGTTGC ATTGGATGCA AGAAAGGTAG AAGTGCGCGG CCTGTTTAAA
AATGCCGCCA TATTGCAGGT TAACGGCCAG CAGCGAATGC TAAAGGTAGG GCAAACTTCG
CCTGAGGGCA TAAAGTTAAT AGCAGCCGAT AGTAAGCAAG CCGAAATTGA AATAGACGGC
AAGCGCACAG TGCTTAGCCT GTCGAAAAAA ATTGCCGCCA CGTTTTCCGA GGCCGCGCTG
GGGGAGGCAC GTATACCCGC AGGTCGAAAT GGCCATTATT TTACAACCGG TATGATTAAC
AATCAGTCGG TTAAGCTGTT GGTGGATACT GGCGCGAGTT CTATAGCGTT AAATTCGATT
GTGGCAAAAC AGTTAGGTAT AGATTACTTA ACCAGCCCTC GCTATGTGGG CGTAGCAACT
GCAAGTGGCA CCACCCGGGG TTATAGGGTT ACTTTGCGAG AAGTTACAGT TGGCGGTATT
ACGTTAAACA ATGTAATTGC AGTGGTTACA GAAGGCGAAT TTCCGCGCGA TATATTATTG
GGTAACACAT TTTTATCCGA ATTGGATATG AAAGTAGAGT CTGGCGTGCT TATTTTGCAG
GCCAAATATT AG
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| Protein sequence | MKLLKSKWNF ACLLVSVIWL ASVNAVALDA RKVEVRGLFK NAAILQVNGQ QRMLKVGQTS
PEGIKLIAAD SKQAEIEIDG KRTVLSLSKK IAATFSEAAL GEARIPAGRN GHYFTTGMIN
NQSVKLLVDT GASSIALNSI VAKQLGIDYL TSPRYVGVAT ASGTTRGYRV TLREVTVGGI
TLNNVIAVVT EGEFPRDILL GNTFLSELDM KVESGVLILQ AKY
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