| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3450 |
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| Symbol | ribA |
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| ID | 3966273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4393162 |
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| End bp | 4393764 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922547 |
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| Product | GTP cyclohydrolase II |
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| Protein accession | YP_528917 |
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| Protein GI | 90023090 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00082081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGACGGTTA AATACGTCGA ATCATCCAAA CTGCCAACCC CAATGGGGAT GTTTGCGATG
CACGGGTTTT CTGACGACAG CAGCGATAAA GAACACGTTG TGCTTACTAT GGGAGATGTT
TCTTCCGAGG AGCCAGTATT GGTGCGCATT CATTCCGAGT GCTTAACCGG CGACGCGCTA
TTTAGTTTAC GTTGTGATTG CGGCGCGCAG TTGCAAGCGG CAATGCATAA AATTGCGATA
GAAGGGCGCG GTGCTATTTT TTACTTGCGC CAAGAAGGTC GTGGTATTGG TTTGTTAAAT
AAAATTCGCG CATACAAATT GCAAGATTGC GGTGCCGACA CGGTAGAAGC AAATGAGCGC
TTAGGTTTTG GTGCCGATAT GCGTGACTAC TCTATTTTAA AGCCCATGTT TGAACACCTA
GGCATAGCGC AAGTAAAACT AATGACCAAC AACCCGCGCA AAATAGATGC CCTTACCCAA
TACGGTATAA ACATTGTTAA TCGCATTCCA CACGAAACTG GGCGCAACCC ACACAATGCC
GATTACCTAG AAACTAAAAA AGGTAAGCTG GGGCATATGT TTGGTGAAAA AGACGGCGAG
TAA
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| Protein sequence | MTVKYVESSK LPTPMGMFAM HGFSDDSSDK EHVVLTMGDV SSEEPVLVRI HSECLTGDAL
FSLRCDCGAQ LQAAMHKIAI EGRGAIFYLR QEGRGIGLLN KIRAYKLQDC GADTVEANER
LGFGADMRDY SILKPMFEHL GIAQVKLMTN NPRKIDALTQ YGINIVNRIP HETGRNPHNA
DYLETKKGKL GHMFGEKDGE
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