| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3445 |
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| Symbol | |
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| ID | 3966249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4383161 |
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| End bp | 4383841 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922542 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_528912 |
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| Protein GI | 90023085 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.937681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000228782 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAGCA CCCACAACCT TTGCCACCAA GTACCTATTC ACGAAAGCGA GCTCGCTTTA
CTAAAAAGCA TCGATTTGAA TATTTTAAAA GGTGAATCTG TTGCCATTGT GGGCGCATCT
GGCTCGGGTA AATCCACTCT GCTTACCATG CTTGCAGGGT TAGATACGCC AACATCGGGC
AATATTGTTA TCGATTCGCA AGATATTACT CAATTAGACG AAGAACAGCG GGCAAAAGTT
CGCGCAGATT ACATTTCTTT TGTTTTTCAA AACTTTCAAT TATTAGGCAG TTTAACCGCA
CTAGAGAACG TAATGCTGCC ATTGGAAGTG CGCGGTAACG CAGACCCTTT AACCAAAGCC
AGCCAGTATT TACAGCGGGT GGGCCTAGGT AAGCGCTTAA CCCACTACCC TAAGCAGCTA
TCTGGCGGTG AACAACAACG CGTAGCGCTA GCACGTGCTT TTGCTTGCGA GGCACCATTA
TTGTTTGCCG ATGAACCCAC TGGTAATTTA GATTCGGCCA CAGGCCGCGC CATTGCCGAT
TTATTATTCG AACTAAACGG TGAAAGCAAT ACTACATTAA TATTGGTTAC TCACGACGAC
AAACTCGCGC AGCGCTGCCA GCGCCAATTG CGCATGGAAG AAGGTCGCAT TAGCGAAATT
ACCACAGCCC ATTTCGCTTA G
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| Protein sequence | MISTHNLCHQ VPIHESELAL LKSIDLNILK GESVAIVGAS GSGKSTLLTM LAGLDTPTSG
NIVIDSQDIT QLDEEQRAKV RADYISFVFQ NFQLLGSLTA LENVMLPLEV RGNADPLTKA
SQYLQRVGLG KRLTHYPKQL SGGEQQRVAL ARAFACEAPL LFADEPTGNL DSATGRAIAD
LLFELNGESN TTLILVTHDD KLAQRCQRQL RMEEGRISEI TTAHFA
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